| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0643 |
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| Symbol | |
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| ID | 4172997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 743439 |
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| End bp | 744680 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053646 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_660226 |
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| Protein GI | 109896971 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAT CCTCTGAGCT ATTTGATGCC GAGTTAATGG CGTTAGCCAA GAGCTTTACG
CGTGTATTCG CAATACAGCG CAATGAAACA TTTGATGCAG GTGAGCAAAT TGCCGTGCAA
TTGTGGCAAG AAAAGCACCT GATTAAACGG TCAACAAATA CCCCACAACA TAACATTGGC
AGGTTTAAGT CAGGCTTTAG CGATAAGAAT TTTTCAGGCA AGCGCTGGCG TGTCTATTCA
CACACATTCG ATGATAAGCA CACCTGGGTC ATGGTAGCTC AGCCGTTGCA GAACCGCTTT
GAACTGGCTG ACAAAATGAT CATTTCCGCG ATGGCGCCTA TTATCATGAC GATCCCGTTG
CTGGCGATCA TTATCTATTT CGCTGTAAAT AGAGGGCTTA GGCCATTGCG CAGCCTATCT
GATGCTCTAC AGCGCCGCTC TCCTCGAAAT TTTTCACCTT TGGTTTTGCA AGAGCCAGCA
ATTGAATTGG TACCCATGGT CAATACACTC AATTCATTGT TAAGCCGACT GCAAGCAGCC
TTTGAGCGAG AGCAGCAGTT TGCGTCTAAT GCCGCTCACG AGCTGCGCAC ACCTTTAAGT
GTGCTGAAAA TTAATTTACA TAATTTGCGC AAAGAAGCCA CCAGCGACAG CTATGTTCAA
CGTATAGACA AACTCCACCA AGATACGGAT CGCATGATCC ATGCGATCAA CCAAATACTC
TTGCTAAGTC GGACCAACCC TGAGTATTTT GAAGCGAACA GTACACAGGT AGATGCTTAT
CACATTGCAC AAAGTGTTAT TTCAGAAATG TACACCAGCA TTGACAACAA ACATCAAACC
ATTGAGTTGA TTGGTAGTAC CCAAATTATA TTAAGTAGCG AGTTTGCCCT GCTGACACTG
ATGCAAAATC TGATTGGTAA TGCCCATAAG TATGCCCCCG TTAAAGGGGT AATTCAGGTC
ATCGTGCAAC AAGATGAACA TGATGTTCTG ATACAAGTTG ACGATTCCGG CAGTGGGCTT
AACGATGATG AATATACAAA AGTGCTGGAG CGCTTTTATC GTTCTAGCAA ACATATGACG
CAAAAAGCGC CGGGTATTGG GTTAGGCTTA GCGATAGTAA AACAGATCGT TGATTTGCAT
CATGGCTTTG TGCATTTGCA GCGTTCAGAG TTAGGTGGCT TGTCGGTGCA AGTTCATCTG
CCTAAAACGC GAAGAGAAGA GGTAAGCAGT GCAAAAGTAT AG
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| Protein sequence | MHKSSELFDA ELMALAKSFT RVFAIQRNET FDAGEQIAVQ LWQEKHLIKR STNTPQHNIG
RFKSGFSDKN FSGKRWRVYS HTFDDKHTWV MVAQPLQNRF ELADKMIISA MAPIIMTIPL
LAIIIYFAVN RGLRPLRSLS DALQRRSPRN FSPLVLQEPA IELVPMVNTL NSLLSRLQAA
FEREQQFASN AAHELRTPLS VLKINLHNLR KEATSDSYVQ RIDKLHQDTD RMIHAINQIL
LLSRTNPEYF EANSTQVDAY HIAQSVISEM YTSIDNKHQT IELIGSTQII LSSEFALLTL
MQNLIGNAHK YAPVKGVIQV IVQQDEHDVL IQVDDSGSGL NDDEYTKVLE RFYRSSKHMT
QKAPGIGLGL AIVKQIVDLH HGFVHLQRSE LGGLSVQVHL PKTRREEVSS AKV
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