| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0642 |
|---|
| Symbol | |
|---|
| ID | 4172996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 743099 |
|---|
| End bp | 743452 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638053645 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_660225 |
|---|
| Protein GI | 109896970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAAGT ATAGATATTG CTTAACCATC ATACTGTTCG TCCATTCAGC TTTTGTTTTT
GCCCTGCCTG AGATGACCAT CACCATTCGG GATCATTTAT TTTATCCATC CGAAGTGCTT
GTCCCTTCCG GTCAAAAGGT AAAGTTAGTG TTTATTAATC ACGATCCCAC TCCAGAAGAA
ATAGACAGCT TCGAGCTGAA CCGTGAAAAA GTCGTTTTTG GTAATGCCAA GGCCAATGTT
TACATAGGTC CTTTAGAAGA AGGGGAATAC CAATTTTTCG GGGAATTCCA TCCTGCAAGC
GCGGTGGGCA AGGTCATAGT GATATCGCCA GAGGCGTATG CAAATGCTCA TTAA
|
|---|
| Protein sequence | MQKYRYCLTI ILFVHSAFVF ALPEMTITIR DHLFYPSEVL VPSGQKVKLV FINHDPTPEE
IDSFELNREK VVFGNAKANV YIGPLEEGEY QFFGEFHPAS AVGKVIVISP EAYANAH
|
|---|
| |