| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0637 |
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| Symbol | |
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| ID | 4172991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 736215 |
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| End bp | 737423 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053640 |
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| Product | Rh-like protein/ammonium transporter |
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| Protein accession | YP_660220 |
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| Protein GI | 109896965 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.246032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATG TCACAAGCGC CACTGAGTTA TTGGTGCAAA GTTCTAATAC TTACTTTTTA
CTCATAGGCG CTATCATGGT TTTTGCCATG CACGCGGGCT TTGCTTTTTT AGAAGTGGGT
ACCGTACGTC ATAAAAATCA GGTCAATGCA TTAGTTAAGA TCATCACGGA TTTTGGTGTG
TCTTGTGTTG CTTATTTTTT CATTGGTTAT TGGGTCGCTT ACGACACCAC TTTTTACAGC
AGCGCGAGCG AGCTAACCAC CAACAACGGT TACGACCTCG TTAAGTTTTT CTTCTTGATG
ACGTTTGCCG CTGCCATTCC GGCCATTATT TCAGGCGGTA TTGCTGAGCG TGCCAAGTTT
AACCCATTCT TACTGGCATC TGCGGTCATC GTTGCCTTAG TGTATCCCTT CTTTGAAGGC
ATAGTGTGGA ACGGCAATTA CGGCGTGCAA GATTGGATAG AGCAAACAAC CGGCGCCCAA
TTCCATGACT TTGCAGGCTC AGTGGTTGTG CATGGTATCG GCGGTTGGTT AGCCCTGGTG
GCGGTATTCT TCTTAGGTTT GCGTAATGGA CGTGTTAAAG ACAAAAAGCT TATCGCTTTT
GCCCCGTCTA ACATTCCTTT TCTAGCCCTC GGAACATGGA TTTTATGTAT TGGTTGGTTT
GGCTTTAACG TCATGTCAGC ACAAACCCTT GATGGCATCA GCGGCTTAGT GGCCATGAAC
TCTCTTATGG CCATGGCCGG TGGTATTATT GCCGCTTGGT TATTTGGCAA AAATGATCCT
GGTTTTGTTC ACAATGGCCC CCTTGCTGGC CTAGTGGCTA TCTGCGCGGG CTCGGATATT
GTGCATCCGA TTGGTGCACT GGCCATTGGT GTAGTAGCAG GATGGCTATT TGTTACCTTG
TTTACCTTTA TACAAAAAAG TAAGAAATTA GATGATGTGC TGGGTGTTTG GCCATTACAC
GGTCTGTGTG GTGCATGGGG CGGTATCGCA GCTGGGATTT TTGGCAGCGA AAGTCTAGGC
GGATTAGGCG GCGTTAGTAT AGCGGCTCAA GCGATGGGCA CTATAGGGGG GATTCTTGTC
GCCCTCATAG GCGGGGTGAT TGTTTACGGC TTAATTAACG CCATCACAGG GCTGCGTTTA
ACAGAAGAAG AAGAGTACAA CGGCGCCGAT TTAACCATTC ACCGTATTGG CTCAACCAAC
GACGACTAA
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| Protein sequence | MQDVTSATEL LVQSSNTYFL LIGAIMVFAM HAGFAFLEVG TVRHKNQVNA LVKIITDFGV
SCVAYFFIGY WVAYDTTFYS SASELTTNNG YDLVKFFFLM TFAAAIPAII SGGIAERAKF
NPFLLASAVI VALVYPFFEG IVWNGNYGVQ DWIEQTTGAQ FHDFAGSVVV HGIGGWLALV
AVFFLGLRNG RVKDKKLIAF APSNIPFLAL GTWILCIGWF GFNVMSAQTL DGISGLVAMN
SLMAMAGGII AAWLFGKNDP GFVHNGPLAG LVAICAGSDI VHPIGALAIG VVAGWLFVTL
FTFIQKSKKL DDVLGVWPLH GLCGAWGGIA AGIFGSESLG GLGGVSIAAQ AMGTIGGILV
ALIGGVIVYG LINAITGLRL TEEEEYNGAD LTIHRIGSTN DD
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