| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0630 |
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| Symbol | |
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| ID | 4173652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 729431 |
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| End bp | 730285 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053633 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_660213 |
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| Protein GI | 109896958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CCTACTTAAC ACAATACATA GCTCCCCTTG TTTTGGCGTT TATCATGTTT
GGCATGGGGC TAAGCTTAAC TAGAAATGAC TTTCAGCAGT TATGGCGCGC TCCGTTGCCG
ATAGTGGTTG GCTTGTTCGG CCAAATGATG CTGTTACCCG CACTGGCTTA TGCACTGGCA
ATCACGTTTG ATTTGGCCCC TAATTTAGCC ATTGGCATTA TGATCCTAGC TGCCTGTCCA
GGCGGCACGA GTTCAAATAT AATTAGTCAG CTGGCCAGAG CAAACCTAGC GTTGTCGGTT
AGCCTGACGG CCATTAGCTC ACTCATATGC GTGCTCACTA CCCCGCTTAT TATCCAATTC
GCTGTTGTGC AATTTGGCCA GCAAGAAGAA CAATCTTTCT CTCTTCTTAC TACCACTCTA
GGGCTAATAT TGATTACCTT ATTACCCGTG TTCATCGGTA TTATTATTCG TCATTATTTT
GCTCAAAAAG CCCTTCGTTG CGAGCCGTTC TTTCGTCACT TGGCCAGTGC CTTTTTGCTC
CTCATGATTG TTGCCATTGT TATTCAAGAA AGAGATACCC TGACCTCTTC TTTCGCAGCG
GTATTTTCAA GTGCACTGAC CTTAAACCTG CTGGCAATCA TGACGGGCAT CGGTTTAGGT
TTATTGTTCA AATTTACACC TAAAGATAGC ATCACGCTGG GTATTGAAGT GGGCGTGCAA
AATTCGGCCA TGGCAATCCT TATCGCGATT ACTTTTTTGC AACGAGCTGA TTATGCTGTT
GCCCCTGGGG TATATGGCGT GACTATGTAT ATCGGAGCAT TTTTACTGGT TCTGTTGGCT
AAGAAATACC GCTAA
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| Protein sequence | MTESYLTQYI APLVLAFIMF GMGLSLTRND FQQLWRAPLP IVVGLFGQMM LLPALAYALA
ITFDLAPNLA IGIMILAACP GGTSSNIISQ LARANLALSV SLTAISSLIC VLTTPLIIQF
AVVQFGQQEE QSFSLLTTTL GLILITLLPV FIGIIIRHYF AQKALRCEPF FRHLASAFLL
LMIVAIVIQE RDTLTSSFAA VFSSALTLNL LAIMTGIGLG LLFKFTPKDS ITLGIEVGVQ
NSAMAILIAI TFLQRADYAV APGVYGVTMY IGAFLLVLLA KKYR
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