Gene Patl_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0626 
Symbol 
ID4173648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp724619 
End bp725203 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content44% 
IMG OID638053629 
Productthymidine kinase 
Protein accessionYP_660209 
Protein GI109896954 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCAGC TTTACTTTTA CTACTCTGCA ATGAATGCAG GGAAATCCAC ATCTTTATTA 
CAATCTGCGT ATAACTACAA AGAGCGAGGC ATGCGCGCCG AAATATTTAC TGCCGCTTTG 
GACGACCGCT TTGGTATTGG TAAAGTCGCA TCGCGGATTG GCCTAGAAGC CAGTGCACAC 
CTTTTCAATG GCTCCAGCAA CTTACATCAG CAAATATTAG AGTTAAATAG CGATAAAAAG 
CTAGATTGCG TATTTATCGA TGAAGCCCAA TTTTTAAATA AACAACAGGT GCAACAACTC 
GTATCTGTGG TGGATGACTT AGACATTCCC GTTCTCGCTT ATGGGCTTAG AACTGACTTT 
GTTGGTGAAA CATTTGAAGG CAGTCGCTAT TTAATGGCTT GGGCTGACAA GCTGATTGAG 
CTTAAAACTA TTTGCCATTG CGGGCGAAAA GCGACCTTTG TAGTGCGCTT GGATGAGCAT 
GGGAATGCGG CAAAAGAAGG TGCGCAAGTT GAAGTCGGCG GCAACGATAG ATACGAGTCT 
ATGTGTCGTA AACACTTCAA AGAGCTGGTG TGGGATCAAG CTTAG
 
Protein sequence
MAQLYFYYSA MNAGKSTSLL QSAYNYKERG MRAEIFTAAL DDRFGIGKVA SRIGLEASAH 
LFNGSSNLHQ QILELNSDKK LDCVFIDEAQ FLNKQQVQQL VSVVDDLDIP VLAYGLRTDF 
VGETFEGSRY LMAWADKLIE LKTICHCGRK ATFVVRLDEH GNAAKEGAQV EVGGNDRYES 
MCRKHFKELV WDQA