| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0624 |
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| Symbol | |
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| ID | 4173646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 722308 |
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| End bp | 724026 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053627 |
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| Product | acetolactate synthase, large subunit, biosynthetic type |
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| Protein accession | YP_660207 |
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| Protein GI | 109896952 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGA TGTCAGGCGC CGCAATGGTT GTGCGAACCC TAAAAGATCT TGGGGTTAAG
CACGTATTCG GGTATCCCGG TGGAGCCGTA TTAGATATAT ATGATGCATT GTACGCGCAA
GAAGATGTAG AACACATTTT GGTTCGCCAC GAGCAAGGTG CTGCGCACAT GGCTGATGGT
TATGCCCGTT CTACTGGTAT TACAGGAACC GTGCTGGTCA CGTCTGGTCC TGGTGCCACA
AATACCCTAA CCGGTATTGC CACTGCTTAT ATGGATTCAA TTCCAATGGT TATCTTGTCT
GGTCAAGTGC CTTCAATGCA TATTGGTGAA GACGCTTTCC AAGAAACCGA TATGGTCGGT
TGTTCGCGCC CTGTGGTTAA ACACAGTTTC CTCGTTAAGC GCGCTGTTGA TATTCCTGAA
GCTATCGCTA AAGCTTATTA TATTGCCAAC ACTGGGCGTC CTGGTCCTGT GGTGGTCGAT
TTACCAAAAG ACATAGTTAA CGTACTTGAA GAGCATCCGT ATCAGTTCCC TGAAGATGTC
ACTATGCGCT CTTATAATCC AACACTTAAG GGACACAGCA AACAAATCAA AAAAGCATCG
AAAGTGTTGC TTGAAGCGAA GCGTCCTATT TTATATGTGG GCGGTGGCGC GATTGCTGCA
GAAGCAAGTG AGCTGGTGAC TGAAATTGCA GAAAAACTAA ACTTGCCTGT TACATCTACT
TTGATGGGGC TGGGTGCATT TTCTGGCGTG CACGAGCAGA GCCTAGGTAT GTTGGGTATG
CATGGCACGT TAGAGTCAAA CAAAGCAATG CACAATGCGG ATTGTATATT GGCACTAGGT
GCGCGTTTTG ATGATCGCGT AACGAATAAC GTTGAAAAAT TCTGCCCCCA CGCAACCATT
ATTCACGTAG ATATCGACCC TGCTTCTATT TCTAAAACGG TTGCTGTGCA CGTGCCGGTT
GTAGGCAGTG TGGACCAAGT GGCAAAGCAG CTTCTAAGCC AAATGGGCGA CATAGATACC
ACTAAGCAAA AGGCTAAGTT GGCTGATTGG TGGGAGCAAA TTGAGCAGTG GCGCGGCCGT
ACCTGCTTGA GCTACAAAAA AGATGATAAC CTGATTAAAC CGCAAGAAGT GATTCAGTCG
GTGTATAAAC ATACAAATGG TGATGCCTAT TTAAGTTCAG ATGTAGGTCA GCATCAAATG
TTTGCAGCTC TGTATTACCC GTTTGCCAAA CCTCGTCGCT GGATAAACTC TGGTGGTTTG
GGCACCATGG GCTTTGGTTT GCCTGCTGCA ATGGGCGTAC AAAAGGCCCA TCCTGATGCA
ACATCGGTGG TTATCACTGG TGATGGCAGT ATTCAGATGA ATATCCAAGA GTTGTCGACG
TGTTTGCAAT ACAAGCTACC GATTAAAATC ATTTCTTTGA ATAACCGCGC CTTAGGTATG
GTTCGTCAAT GGCAAGATAT GAACTACAAG AGCCGTTATT CAAGCTCTTA TATGGATTCT
ATGCCTGACT TCGTGAAGCT TGCCGAAGCC TATGGTCACA TTGGTATTCG TGTTGAGCAT
CCAGACGATT TAGATGCCGC CATGGAGCGT TGTTTCGCAG AGAAGGAACG CTTGGTGTTT
ATGGACATCG CAATCGATCA AAACGAACAC GTATACCCCA TGCAGATTAA ATTTGGCGCA
ATGGACGACA TGAGATTAAG CAAAACGGAG CGCACATAA
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| Protein sequence | MEMMSGAAMV VRTLKDLGVK HVFGYPGGAV LDIYDALYAQ EDVEHILVRH EQGAAHMADG
YARSTGITGT VLVTSGPGAT NTLTGIATAY MDSIPMVILS GQVPSMHIGE DAFQETDMVG
CSRPVVKHSF LVKRAVDIPE AIAKAYYIAN TGRPGPVVVD LPKDIVNVLE EHPYQFPEDV
TMRSYNPTLK GHSKQIKKAS KVLLEAKRPI LYVGGGAIAA EASELVTEIA EKLNLPVTST
LMGLGAFSGV HEQSLGMLGM HGTLESNKAM HNADCILALG ARFDDRVTNN VEKFCPHATI
IHVDIDPASI SKTVAVHVPV VGSVDQVAKQ LLSQMGDIDT TKQKAKLADW WEQIEQWRGR
TCLSYKKDDN LIKPQEVIQS VYKHTNGDAY LSSDVGQHQM FAALYYPFAK PRRWINSGGL
GTMGFGLPAA MGVQKAHPDA TSVVITGDGS IQMNIQELST CLQYKLPIKI ISLNNRALGM
VRQWQDMNYK SRYSSSYMDS MPDFVKLAEA YGHIGIRVEH PDDLDAAMER CFAEKERLVF
MDIAIDQNEH VYPMQIKFGA MDDMRLSKTE RT
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