Gene Patl_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0623 
Symbol 
ID4173645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp721719 
End bp722087 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content39% 
IMG OID638053626 
Producthypothetical protein 
Protein accessionYP_660206 
Protein GI109896951 
COG category[S] Function unknown 
COG ID[COG3085] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAC TTTCTAGAGA ATCATTGTTT CAACGTGTTT TTAGCGACCC TAAAAACTAT 
CCTTATGGTT TTTCACGTTC AGGTGACTTT TCAATTTCTG AAAGCAAAGC ACTGAGCCAA
TACGGTTGTT TAATTGCTGC CTTACTTGAT GGCCGAATTG AACCGGAATG TGATGAAGAT
AACTCACTGT TAGCTGTGGC TAAAGGTGAG AAAGACCCGA GTAATGTTGC TGAAAAAGCA
TGGTCTAAGT ATGACAAACG TATACATCGA CCTAAACTTG GCAATATTTA CGGTAGTAGA
CCGTCATCTC AGAGCAATGA TGATGACTTG ACTGAAGATA GTGACTTAGA AATTGAGCTG
GATGATTAA
 
Protein sequence
MAQLSRESLF QRVFSDPKNY PYGFSRSGDF SISESKALSQ YGCLIAALLD GRIEPECDED 
NSLLAVAKGE KDPSNVAEKA WSKYDKRIHR PKLGNIYGSR PSSQSNDDDL TEDSDLEIEL
DD