Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0606 |
Symbol | |
ID | 4174094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 698816 |
End bp | 701434 |
Gene Length | 2619 bp |
Protein Length | 872 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638053609 |
Product | phosphoenolpyruvate carboxylase |
Protein accession | YP_660189 |
Protein GI | 109896934 |
COG category | [C] Energy production and conversion |
COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00195008 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCAAAAA TTCTAGACTC ACAACTCAAA GAAACCGTAC GTAATCTAGG TTCAACGTTA GGTGACATGA TCCGAGCCCA ATTGGGGGAT GAGTGGCTGC AACGAATAGA AACCATCAGA CTAGATGGTC GCGAATCATA TAAAGGCGAC AGTGAATGTT CTGACAAACT TAAAGCACTA TTTAGTGAGC TCGAAGATGA GCAGCTGTTA GTCGTAGGTC GTGCATTTTC TCAATTTCTA AATTTAGCGA ATATCGCCGA GCAAGAATTT AACAGCGCCA ACCATGATCA AGACTCTATT CAAGAATTGT TCAATCATTT GGACAAAGAT AACGTATCTG CAGAGACCTT CGAAAAAGCG GTAAACCAAC TCAGTATTGA ATTGGTATTA ACGGCACATC CTACTGAGGT CACTCGTCGC ACATTGATCC ACAAACACAG CGAATTAGCA CAATGTTTGC GTCAAATACA TCAAACGAGC TTATCTGACA TTGAACGAGA TAAAATTCGC ACCAGAATAG CGGATTTGGT GGCACAAGCA TGGCACACAG AAGAAATTCG CACCGTACGC CCTACCCCTG TAGATGAAGC TCGTTGGGGT TTTTCGGTTA TCGAAAACTC GTTGTGGGAA GCAGTACCCG ATTTCGTACG TGAGCTAAGC GCAAAATTTG AAGCGAAATA CAATCTTGCG CTCCCCCTAG ATGCAGCCCC AGTGAAATTA AGCTCGTGGA TGGGCGGTGA CCGAGACGGT AACCCATTCG TAACATCGAA GGTGACTCAG CAAGTTCTGT TACTCGCCCG TAAACGCGCA GCGAAACTGT TCGCTCAAGA CGTGGATATG TTACAAGTAG AGCTGTCGAT GAGTGATTGT GACGACACAA TTCGTTCAAT GGTAGGCGAT GAACTTGAAC CGTATCGTGC ACTATTACGT CCTTTGCTGG ACACGCTAAC CAATACCAAA AATGGTATTG CTGAATTTCT AAGCGGTGCG TCAGTAGACG ACAGTAAATG GATTGCCAGC AAGGATGAGC TGCTGACTCC GCTAATGCTA TGTTACAACT CGTTGCAAGC TTGCGGCATG AGCGTCATTG CCGATGGGCG CTTGTTAGAC ACCATTCGCC GAGTACATTG TTTTGGAGTG CATCTACTTA AGTTGGATAT TCGCCAAGAT TCTGAGCGTC ACGCAGACGT ATTCAGTGAG CTTACCCGCC ACTTGGGCAT GGGCGACTAC GGCAATTGGA GCGAAGAAGA CAAGCAAGCA TTCTTGTTAA AAGAATTGAG CTCGAAGCGA CCTTTATTTC CAGCCAAATG GCAGCCCTCT GCCGACGTTC AAGAAGTGAT TGATACTTGT AAAGTGGTCG CACAGCACAG TGAAGAAGGC TTCGGTATTT ACATTATATC AATGGCGAGT TTACCTTCAG ACGTGCTTAG CGTGCACCTA TTGTTGCGCG AATTCGGCGT GACATGGCCT ATGCCTGTTG CCCCATTATT CGAAACGCTT GACGATCTGA ATGCTGCTGC CACTGTTATT GATGCCTTAA TGAACATCGA CTGGTATCGT GGTTACATTC AAGGTCATCA GTACGTAATG ATAGGTTATT CTGACTCAGC GAAAGACGCT GGCGCTATGG CTGCAGGTTG GGCTCAGTAC GAGTCGCAAG AAGCCCTTGT TGGGATTGCT GAAAAGTACG GCGTTGAATT AACGCTGTTT CATGGTCGCG GCGGTACAAT TGGGCGTGGT GGTTTACCCG CTCATGCAGC GATCCTGTCC CAGCCTCCAG GCTCTTTATC TGGCGGTTTC CGTGTTACCG AGCAAGGTGA AACCATTCGT TATAAATTTG GCATGCCGCA ACTTGCTCAG CGCAGTTTAG CTTTGTACGC CAGCGCGATA TTAGAAGCCC TAATTTCGCC GCCGCCAGCG CCGAAACAAG AATGGCGTGA TTTAATCACC GAAGTGGCTG CAAACGCACG CGACAACTAC CGCAATACAG TACGTCACGA TGAGAATTTC GTGCCTTATT TCAGAGTCGC CACGCCGGAA CAAGAACTAG GCAAATTGCC ATTGGGTAGC CGCCCAGCCA AGCGTAAACC TAGCGGCGGG ATCGAAAGCC TACGTGCTAT ACCTTGGATA TTCGCATGGG CGCAAACACG TTTGGTTTTA CCGTCGTGGT TAGGTGCAAT GAAAGCGGTT CAAACCGCTA TTGACGCAGG TCATCGCCCA CTGATCGACG ATATGCTTCA AAACTGGCCG TTCTTTCACT CGCGCTTCTC CATGCTAGAT ATGGTGTTCG GTAAAGCCGA CCCACGTATT AGCGCTGAAT ATGACAAGCG TTTGGTCCCT GAAGAACTGC GGCATTTAGG TGATGCCTTG CGTGATGAAC TCAATATGAG TATGAGCTTG TTACTCGATG TGCTTCAACA AAAAGAAGTC ATGGAGTCAG ACCCGAAAGG TAATGAATCT ATGAACATCC GTGCAGGTTA CTTACAACCA TTGCATTTTT TACAAATTGA ATTGCTAGAG CGTATTCGTG CAAAAGGTGA AGAAGCGGAC CCAACGTTAG AGCGCGCCAT GATGGTGACC ATCGCCGGTA TTGCAGTAGG TATGAGGAAT ACGGGGTAG
|
Protein sequence | MPKILDSQLK ETVRNLGSTL GDMIRAQLGD EWLQRIETIR LDGRESYKGD SECSDKLKAL FSELEDEQLL VVGRAFSQFL NLANIAEQEF NSANHDQDSI QELFNHLDKD NVSAETFEKA VNQLSIELVL TAHPTEVTRR TLIHKHSELA QCLRQIHQTS LSDIERDKIR TRIADLVAQA WHTEEIRTVR PTPVDEARWG FSVIENSLWE AVPDFVRELS AKFEAKYNLA LPLDAAPVKL SSWMGGDRDG NPFVTSKVTQ QVLLLARKRA AKLFAQDVDM LQVELSMSDC DDTIRSMVGD ELEPYRALLR PLLDTLTNTK NGIAEFLSGA SVDDSKWIAS KDELLTPLML CYNSLQACGM SVIADGRLLD TIRRVHCFGV HLLKLDIRQD SERHADVFSE LTRHLGMGDY GNWSEEDKQA FLLKELSSKR PLFPAKWQPS ADVQEVIDTC KVVAQHSEEG FGIYIISMAS LPSDVLSVHL LLREFGVTWP MPVAPLFETL DDLNAAATVI DALMNIDWYR GYIQGHQYVM IGYSDSAKDA GAMAAGWAQY ESQEALVGIA EKYGVELTLF HGRGGTIGRG GLPAHAAILS QPPGSLSGGF RVTEQGETIR YKFGMPQLAQ RSLALYASAI LEALISPPPA PKQEWRDLIT EVAANARDNY RNTVRHDENF VPYFRVATPE QELGKLPLGS RPAKRKPSGG IESLRAIPWI FAWAQTRLVL PSWLGAMKAV QTAIDAGHRP LIDDMLQNWP FFHSRFSMLD MVFGKADPRI SAEYDKRLVP EELRHLGDAL RDELNMSMSL LLDVLQQKEV MESDPKGNES MNIRAGYLQP LHFLQIELLE RIRAKGEEAD PTLERAMMVT IAGIAVGMRN TG
|
| |