| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0601 |
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| Symbol | |
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| ID | 4174089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 691284 |
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| End bp | 691754 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053604 |
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| Product | 30S ribosomal protein S7 |
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| Protein accession | YP_660184 |
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| Protein GI | 109896929 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0049] Ribosomal protein S7 |
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| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00129105 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAGAA GAAGAGTTGT AGGTCAACGC AAAATCCTAC CGGATCCTAA GTTCGGATCG
CAGTTACTTG CAAAATTTAT GAACGTTGTC ATGTTAGATG GCAAAAAATC GACTGCTGAA
AAAATCGTTT ACGGTGCACT CGACATTGTT GCTGATAAAG CTGGCAAGTC TCACCTAGAA
ATTTTCGAAG ACGCTTTGGA CAACATCCGT CCTACGGTAG AAGTTAAATC TCGCCGTGTG
GGTGGTTCTA CGTACCAAGT ACCAGTAGAA GTTCGTCCTG TTCGTCGTAA TGCCCTAGGT
ATGCGCTGGT TAGTTGACGC TGCTCGTAAA CGTGGTGAAA AATCAATGGC TCAACGCCTT
GCAGCTGAAA TGCTCGACGC TGCTGAAAAC AAAGGTTCTG CGGTTAAGAA ACGTGAAGAC
GTTCACCGTA TGGCTGAAGC CAACAAAGCA TTCGCTCACT ACCGTTGGTA A
|
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| Protein sequence | MPRRRVVGQR KILPDPKFGS QLLAKFMNVV MLDGKKSTAE KIVYGALDIV ADKAGKSHLE
IFEDALDNIR PTVEVKSRRV GGSTYQVPVE VRPVRRNALG MRWLVDAARK RGEKSMAQRL
AAEMLDAAEN KGSAVKKRED VHRMAEANKA FAHYRW
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