| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0592 |
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| Symbol | |
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| ID | 4173249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 678242 |
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| End bp | 678619 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053595 |
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| Product | preprotein translocase, SecE subunit |
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| Protein accession | YP_660175 |
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| Protein GI | 109896920 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000922511 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA AAGCGGAAAA TAGTTCAAAT CCATTAGACT TAGTTAAATG GCTAGTTGTT
TTGGTTTTGT TAGGTGGTGC GGTTGCAGCA AATTCCATCT ATGAAGATAT ATCAGTACTT
TATCGCGCAC TTGGTGTCGT CGCAGCTGTC CTTGTTGCCG GTTTTATTGC CGCTTCAACG
GAAAAAGGTA GCAGCTTTTT GACCTTCGCT AAAGATGCTC GCACGGAAGT ACGAAAAGTT
GTTTGGCCCA CCCGCCAAGA AGCAACACAG ACGACAATTA TTGTTTTAGT TGCTACAGCC
TTCATGTCAC TAGTACTGTG GGGCCTTGAC CTCATTATCG TACAGTTAGT TTCTTTTATC
ACCGGCTTAG GAATTTAA
|
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| Protein sequence | MSEKAENSSN PLDLVKWLVV LVLLGGAVAA NSIYEDISVL YRALGVVAAV LVAGFIAAST
EKGSSFLTFA KDARTEVRKV VWPTRQEATQ TTIIVLVATA FMSLVLWGLD LIIVQLVSFI
TGLGI
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