Gene Patl_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0590 
Symbol 
ID4173246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp675225 
End bp675845 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID638053592 
Productdimethylmenaquinone methyltransferase 
Protein accessionYP_660173 
Protein GI109896918 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.246427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACCA TGGCTGATTT TGTAAAAGTG TCTCCCTGTG AATATTCAGA AGGGTTAGGG 
CGTGAACAAT TTGTAGATGG CGCTATTAGA GAGTTATGGC CGCAAATGCC TAGAATTGCA 
GGGCCAGCAT TTACGGTTAA ATGTGCGAAG GGTGATCATC TTAGTCTACA TGCCGCTATA 
TACCGTGCAG CCCCAGGAGA CATCATAGTC GTTGAAGCGG ACCCTGAGTT TGCCAGCGCA 
GGGGGAAATG TATGCGCTGT CGCTCAGCAA CGGGGGATTG CGGGCTTTGT CATAGATGGC 
GTCATCCGTG ATTTAGGCGA GGTACGAGAT CTGCAATTTC CTGTCTATGC CCGTGGTGTT 
ATTCCAGTAC CAGCTAAAAA AGAGCAAATT TTGCCTTTTA ATCAACCAAT TAACTGCGGC 
GGTGTACGCG TCTGTGCTGG GGATATAGTC GTGGCTGACG AAGAGGGTAT TGTAGTTATT 
CCGAAAGCGT TGGCCGAAGA AGCTTATCGC TTGGGGAAAG AAAGAACAGA CAAAGACGCA 
GCAATGTCAT TAAGTGAATG GCGCGAAGCT CATGAAGCCA AAATTGAAGC GACCCTCAAG 
GCTTTAGGCT TCCAAGATTA A
 
Protein sequence
MLTMADFVKV SPCEYSEGLG REQFVDGAIR ELWPQMPRIA GPAFTVKCAK GDHLSLHAAI 
YRAAPGDIIV VEADPEFASA GGNVCAVAQQ RGIAGFVIDG VIRDLGEVRD LQFPVYARGV 
IPVPAKKEQI LPFNQPINCG GVRVCAGDIV VADEEGIVVI PKALAEEAYR LGKERTDKDA 
AMSLSEWREA HEAKIEATLK ALGFQD