| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0572 |
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| Symbol | |
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| ID | 4174019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 658888 |
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| End bp | 659166 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053574 |
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| Product | HPr family phosphocarrier protein |
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| Protein accession | YP_660155 |
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| Protein GI | 109896900 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAGC GATTAGAAAA AACCCTACTC ATAGTGAACA AGTTAGGGCT GCATGCCAGA
GCGGCGACTC AATTGGTTAA GCTTGCGAAT CAATTTGAAG CTGAAGTCAC TATTGTTCAG
GATGACAAAA GTGCCTCAGC AAGCAGTGTG CTGGGCCTAA TGATGTTAGA GAGTTGCCAA
GGCAAAGAAA TTCAAGTGAT ATCTGAAGGG AAAGACGCGC GCCAAGCGAT GGATGCTGTT
GAAGAGCTTA TTGTCGGAAA ATTCAACGAA AGCGAGTAA
|
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| Protein sequence | MSERLEKTLL IVNKLGLHAR AATQLVKLAN QFEAEVTIVQ DDKSASASSV LGLMMLESCQ
GKEIQVISEG KDARQAMDAV EELIVGKFNE SE
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