Gene Patl_0570 details

Gene Information

• Locus tag: Patl_0570
• ID: 4174017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 657600
• End bp: 658043
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638053572
• Product: PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_660153
• Protein GI: 109896898
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATAT CAAATATTCT TCACCCTGAC TGCGTCGTAT GCGCAGTTCA GGGGTCCAGC 
AAAAAGCGCA TTTTAGAGCT TATTAGTCAA TTGGCATCTG AGCACCTTGT TGAAGTAGAC 
CAAGCGACCA TTTTATCCAG TTTAGCGGGG CGCGAGAAAA TGGGGTGTAC GGGCATTGGT 
GGTGGTATAG CACTACCACA TGGCCGTATA AAAGGGCTAG AGTCAGCCCT AGGCGTGCTT 
GTAACGTGCC AACCTCCGGT CCAGTATGAC GCCATCGATA ACATGCCAGT GGATATCTTC 
TTTGCTATTT TAGTACCAGA GGAAAAGGCC CAAGAGCACC TACAAACCTT GTCGGCGATA 
GCCAAAAAAT TCGTTGATAA AGACATTTTA AATCGTTTGC GCAGTGCAAC CACAGACCAA 
GAATTATTTC AGGTACTCAG TTAA 

 

Protein sequence

MEISNILHPD CVVCAVQGSS KKRILELISQ LASEHLVEVD QATILSSLAG REKMGCTGIG 
GGIALPHGRI KGLESALGVL VTCQPPVQYD AIDNMPVDIF FAILVPEEKA QEHLQTLSAI 
AKKFVDKDIL NRLRSATTDQ ELFQVLS