| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0557 |
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| Symbol | |
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| ID | 4172244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 647921 |
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| End bp | 648253 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638053559 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_660140 |
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| Protein GI | 109896885 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3113] Predicted NTP binding protein (contains STAS domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.102559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAATG CAACTTCACC AAAGTTGACG ATTGTGAACG ACTCATCTTC CCCTGAGAGT
TTCTTACTCT CGGGGAATTT GAATCGAGAT ACTATCCCTA ACTTTTGGCC CGATAGCCTA
CAGCAACTTA CGAATGCGAA ACGCACGAAC AAACCATTGG TGTTGAATTT AGAAAAAATA
ACGCAAATTG ATACCGCTGG TTTAGCGTGG TTAATCAATC TAATCCGAGA TGCCAAGAAG
CAGGATATCG AGTTTAGTTT GCTCAATCCT CCAGATACAT TATTAAATTT GGCTAAAATA
AGCGACGTAG ACGGCTTTTT ACCGTTACAA TAA
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| Protein sequence | MSNATSPKLT IVNDSSSPES FLLSGNLNRD TIPNFWPDSL QQLTNAKRTN KPLVLNLEKI
TQIDTAGLAW LINLIRDAKK QDIEFSLLNP PDTLLNLAKI SDVDGFLPLQ
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