| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0555 |
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| Symbol | |
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| ID | 4172242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 646307 |
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| End bp | 647566 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053557 |
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| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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| Protein accession | YP_660138 |
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| Protein GI | 109896883 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
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| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.136246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAC TACTCATTAA AGCGTCAAAG CCGTTACAGG GCTCAGTACG CATTTCAGGC
GCTAAGAACG CGGCACTTCC TATTTTAATG TCGAGTATTT TAGCCGATAC CACCTGCTAC
TTTGATAACG TCCCCGAGCT AAGAGACATC AACACCAGCC TCGCCTTGCT GGCTGAGTTA
GGCGCTGACG CTAAACGTGT TTCTGGTCAC GCTGTAGAAA TAGACCCGAG CAGCATTAAC
AATTGCAACG CATCTTATGA CTTAGTCAAA ACCATGCGCG CGTCCATTTT AGTATTAGGC
CCTTTGCTCG CCAAATACGG TGAAGCTAAT GTGTCGTTGC CTGGCGGCTG TGCGATAGGT
GCTAGACCGG TCAATTTGCA CCTGCAAGGT TTAGAGAAAA TGGGCGCAAA AATCGATGTA
GAGGCCGGAT ATATTCGCGC TAAAGTGGAT GGCCGTCTTA AAGGAGCAAA CATATTCATG
GATATGGTCA GTGTTGGTGC GACCGAAAAC CTCATGATGG CCGCTTGCTT AGCCGACGGT
GAGACGGTGT TAGAGAATGC GGCTAGAGAG CCCGAAATTG TTGACCTCGC TAACTGTTTA
AATGCAATGG GTGCAAAGGT AACACATGCA GGCAGTGACA AGATCCGCAT CCAAGGGGTT
GAACGCTTAC AAGGTTGTCG TTATGCAGTA TTACCTGATC GCATTGAAAC CGGCACATTT
CTTATTGCGG CAGCCGTAAC CGGCGGGAAA ATTCGCTGTG AAAACGCGGC CCCGGAAACA
CTCGATGCCG TGCTTGATAA ACTCGTTATG GCGGGCGCAG TGATTACCAC AGGTGATGAT
TGGATAGAGC TTGATATGCA AGGCCATCCA CTTACAAGCG TCAATATAAA GACCGCTCCA
CACCCTGGCT TTCCCACTGA CATGCAGGCG CAATTTGTCG CCCTAAACTG CGTGGCACAA
GGAACTGGCG TGGTGACTGA GAACATCTTT GAGAATCGAT TCATGCATGT TCCTGAACTA
CAGCGTATGG GGGCTAAAAT TGATTTAGAG ACCAATAGTG CAGTGTGTCA TGGGGTATCT
AGCCTTAAGG GCGCGCAGGT CATGGCGACT GATTTGCGTG CATCAGCCAG TTTAGTCATT
GCAGGTCTAG TGGCTGAAGG TGAAACCGTA GTCGATCGTA TTTATCATTT AGACCGCGGC
TACGAACATA TTGAAACTAA ATTAAATGGA CTCGGCGCAA ACATTCAGCG CATTAAGTAG
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| Protein sequence | MDKLLIKASK PLQGSVRISG AKNAALPILM SSILADTTCY FDNVPELRDI NTSLALLAEL
GADAKRVSGH AVEIDPSSIN NCNASYDLVK TMRASILVLG PLLAKYGEAN VSLPGGCAIG
ARPVNLHLQG LEKMGAKIDV EAGYIRAKVD GRLKGANIFM DMVSVGATEN LMMAACLADG
ETVLENAARE PEIVDLANCL NAMGAKVTHA GSDKIRIQGV ERLQGCRYAV LPDRIETGTF
LIAAAVTGGK IRCENAAPET LDAVLDKLVM AGAVITTGDD WIELDMQGHP LTSVNIKTAP
HPGFPTDMQA QFVALNCVAQ GTGVVTENIF ENRFMHVPEL QRMGAKIDLE TNSAVCHGVS
SLKGAQVMAT DLRASASLVI AGLVAEGETV VDRIYHLDRG YEHIETKLNG LGANIQRIK
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