Gene Patl_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0544 
Symbol 
ID4172231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp635057 
End bp635401 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content47% 
IMG OID638053546 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_660127 
Protein GI109896872 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTGC AAACAGCAGT TCCAATCGAA TTCTCCGACG CCGCCGCACG TAAAGTTAAG 
GCGCTTGTCG AGGAAGAAGA AAACCCTAAT TTGAAATTAC GTGTTTATGT TACTGGTGGT
GGTTGTTCAG GTTTTCAATA CGGCTTTACC TTCGATGAAA AAGTAAATGA CGGTGACACG
ACCATAGACA AAGATCAGGT GACCTTGGTG GTTGACCCCA TGAGCCTTCA GTACCTATTA
GGTGGCGAGG TTGATTACAC TGAGGGTCTT GAAGGCTCTC GTTTCTTAGT CAATAACCCA
AATGCGACCA CGACATGTGG CTGCGGCGCT TCTTTCACCG TATAA
 
Protein sequence
MSVQTAVPIE FSDAAARKVK ALVEEEENPN LKLRVYVTGG GCSGFQYGFT FDEKVNDGDT 
TIDKDQVTLV VDPMSLQYLL GGEVDYTEGL EGSRFLVNNP NATTTCGCGA SFTV