Gene Patl_0521 details

Gene Information

• Locus tag: Patl_0521
• ID: 4173465
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 604827
• End bp: 606767
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638053523
• Product: acetate--CoA ligase
• Protein accession: YP_660104
• Protein GI: 109896849
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCAAC AAATTTATCC CGTTCCAGCA CACGCTAAAG AGCATAGCCA CCTTACACCA 
GCCGATTACG CGCGCATGTA CGCAGAATCA GTAGAGCAAC CTGAAGTATT CTGGGCTGAG 
CAAGCTAAAT CACTTGATTG GGTCAAAACC CCAACCAAAA TCAAAAACAC GTCTTTTGAT 
GCTCATCATG TAAGTATCAA GTGGTTTGAA GACGGCGAAT TGAATGTGGC ATACAACTGT 
ATTGATCGTC ACTTAGCGAA AAGAGGTCAC GTAACAGCCT TTATCTGGGA AGGTGACGAC 
CCTCATAGCC ACGACATTAT CACTTACCAT CGTTTACATG ACGAAGTCGC GAAAATCGCC 
AACGGCTTGC GCAAGCTAGG TGTAGGCAAG GGCGACAGAG TTGCGATTTA TATGCCTATG 
ATCCCGCAGG CTGTGTATGC CATGCTTGCA TGCGCGCGGA TAGGCGCTGT ACACACCGTC 
ATTTTCGGCG GTTTTTCGCC TAATGCAATT GCCGACAGAG TGAATAATTG TCAAGCGAAG 
GTGTTGATTA CCGCGGATGA AGGGCTAAGA GCTGGTAAGC ATATTCCATT AAAAGACAAT 
GTGGATACGG CATTGGCTGA ACATGACTGC CCTAGCATGG AGCAAGTTAT CGTATTCAAA 
CATACCGGCA GTCACGTGAG CTGGGGTAAA GATGATGTTT GGTGGCATGA CTTAACGGAT 
GGTTGTTCTA CCGATTGTCC GCCAGAGGTA ATGAACGCAG AAGATCCGCT TTTTATCTTG 
TATACATCCG GCTCTACCGG CCAGCCTAAA GGAGTAGTGC ACACCACCGG GGGTTACTTG 
CTATGGGCAT CCATCACCCA TAAATACGTT TTTGATTATA AACCAGGAGA TATTTACTGG 
TGTGCAGCCG ATGTTGGCTG GGTGACAGGT CACAGTTATA TCGTATATGG CCCTCTTGCC 
AACGGCGCGA CCAGTGTTAT GTTTGAAGGG GTACCTACTT ACCCTGATGT ACGCCGAATT 
GGCCAAATAG TTGATAAGCA CAAGGTGAAT ATCCTTTACA CGGCGCCTAC TGCTATTCGT 
GCATTAATGG CCCACGGTGA TTTCCCCACT GAGGGGATTA GTGGCGAATC ATTACGCTTA 
CTTGGTTCAG TGGGTGAGCC CATTAACCCA GAGGCATGGC ATTGGTATTA TACGACTGTT 
GGCCAGTCAC GATGCCCGAT TGTGGACACA TGGTGGCAAA CTGAAACGGG CGCTGCCATG 
TTAACACCTC TCCCCAGTGT CACAGCGATG AAGCCAGGCG CTGCTAGCCA TCCATTTTTC 
GGTGTGCAGC CCGCATTGGT AGACGGCCAA GGCAATGAAT TGTCTGGCGC AACTGAAGGC 
AATTTAATTA TTACCGATAG TTGGCCAGGT CAAGCGCGCA CCGTTTACGG CGATCACGAA 
CGTTTTGTGC AAACGTATTT TACCACTTAC CCAGGTACTT ATTGCACCGG TGATGGTGCT 
CGTCGTGACG AGGACGATTA CTTCTGGATC ACAGGGCGAG TAGATGATGT ACTCAATGTG 
TCGGGCCATC GCTTAGGTAC CGCTGAAATT GAAAGTGCAC TGGTTTCCCA TAATGCGGTA 
GCTGAAGCCG CGGTGGTAGG CTACCCCCAT GATTTGAAAG GCCAAGGTAT TTATGTATAT 
CTGATGCCCA ATGAAGGTGT TGAGATAACG GATGAGCTTA CAAAAGAGGT TTCTAATTGG 
GTACGTAAAG AACTTAGCCC CATTGCGACA CCAGACTTGA TACAATGGTC CTCAGGGTTA 
CCGAAAACAC GCTCTGGTAA AATTATGCGC CGGATTTTGC GCAAAATTGC TGCCAATGAA 
TATGAACAAC TCGGTGATAC GTCTACGTTA GCTGACCCAA GTGTGGTTGA TACCCTAATA 
GAGCAACGTT TGAACCGATA A 

 

Protein sequence

MSQQIYPVPA HAKEHSHLTP ADYARMYAES VEQPEVFWAE QAKSLDWVKT PTKIKNTSFD 
AHHVSIKWFE DGELNVAYNC IDRHLAKRGH VTAFIWEGDD PHSHDIITYH RLHDEVAKIA 
NGLRKLGVGK GDRVAIYMPM IPQAVYAMLA CARIGAVHTV IFGGFSPNAI ADRVNNCQAK 
VLITADEGLR AGKHIPLKDN VDTALAEHDC PSMEQVIVFK HTGSHVSWGK DDVWWHDLTD 
GCSTDCPPEV MNAEDPLFIL YTSGSTGQPK GVVHTTGGYL LWASITHKYV FDYKPGDIYW 
CAADVGWVTG HSYIVYGPLA NGATSVMFEG VPTYPDVRRI GQIVDKHKVN ILYTAPTAIR 
ALMAHGDFPT EGISGESLRL LGSVGEPINP EAWHWYYTTV GQSRCPIVDT WWQTETGAAM 
LTPLPSVTAM KPGAASHPFF GVQPALVDGQ GNELSGATEG NLIITDSWPG QARTVYGDHE 
RFVQTYFTTY PGTYCTGDGA RRDEDDYFWI TGRVDDVLNV SGHRLGTAEI ESALVSHNAV 
AEAAVVGYPH DLKGQGIYVY LMPNEGVEIT DELTKEVSNW VRKELSPIAT PDLIQWSSGL 
PKTRSGKIMR RILRKIAANE YEQLGDTSTL ADPSVVDTLI EQRLNR