| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0518 |
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| Symbol | |
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| ID | 4173462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 600524 |
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| End bp | 601231 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053520 |
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| Product | adenosylhomocysteine nucleosidase |
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| Protein accession | YP_660101 |
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| Protein GI | 109896846 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG CCATTTTAGG TGCCATGGAT GAAGAGATTA CCCTTCTGAA AGAATCAATT
AGTGGGCTTG TTGAGCATCA ACATGCGCAT TTAACACTTT ACACTGGCCA GTTACAGGGT
GCCGACGTCG TCTTAGTTAA ATGTGGCATT GGCAAAGTTG CGGCTGCAGT TGCCACGACC
ATAGTCGTGG ATAAATTTGC TCCGGATTTC GTGGTCAACA CCGGCTCAGC GGGTGGATTT
GACCAAGCAT TGAGCATAGG TGATATCGTG ATCGCTAATG AAGTTGTACA CCACGACGCC
GACTTGACCC ACTTTGGTTA TGCTCTGGGC CAATGTGCTG GTATGCCAGA AACCTACCTA
TGTGATACCG CACTAATTGA GGCGGCCGAG AAAGCCGCAA TCACCTTAGG TGAAGCCAAG
ACTAAGCGCG GGCTAATTTG TACTGGTGAT GCTTTTATCG GCAGCGACGA AGCAGCCGCT
AAACTACGAA CCGATTTCCC CGCTATCGCC GCGGCAGAAA TGGAAGGCGT CGCGATAGGC
CAAACCTGTC ACTTGCTTAA CGTGCCGTTT TTGGTGATCC GCTCTTTGTC AGATATTGCA
GGCAAAGCTT CGACCGTATC CTTTCAAACA TACTTAGAGC AGGCAGCAAA ACACTCAGCC
ATGCTGGTGA TGGAAATGCT CACCGTACTG CAAAACCAAA CTAAATAA
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| Protein sequence | MKIAILGAMD EEITLLKESI SGLVEHQHAH LTLYTGQLQG ADVVLVKCGI GKVAAAVATT
IVVDKFAPDF VVNTGSAGGF DQALSIGDIV IANEVVHHDA DLTHFGYALG QCAGMPETYL
CDTALIEAAE KAAITLGEAK TKRGLICTGD AFIGSDEAAA KLRTDFPAIA AAEMEGVAIG
QTCHLLNVPF LVIRSLSDIA GKASTVSFQT YLEQAAKHSA MLVMEMLTVL QNQTK
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