| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0513 |
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| Symbol | |
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| ID | 4173457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 595672 |
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| End bp | 596991 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053515 |
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| Product | peptidase M23B |
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| Protein accession | YP_660096 |
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| Protein GI | 109896841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases
[COG3061] Cell envelope opacity-associated protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.842896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATGAGT TGAATTTTCC TGTGGTAAAA AAAGCCTTTT CACAATTACC TAAAGCACAT
AAGTGGGCGG TTGCTTCCCT CGCGTCTATC GTGCTTATTC TTGCCCTATT CCCATCAGAC
CGTGCCAGTG CTTCTCGTAA CACCGAGGCC GCTTTATTAG AGATCGGTAA ACGCTACGAA
CTACCTATTA GCACAGATCA TTTATCGGTC AGCAGTGAAG AACACGTTAG CGATGACGTT
GAATGGAACA CTTATCAAGT TAAGCGCGGG GATACGCTGG CCAAGATTTT TAAGCGCGCC
GGGCTGTCCG CTCGCGACAC TTATAATGTG AGCAGTGCTG GCGAACTCGC TAAAATGCTT
TTAAAGATCC GCCCTGGTCA ACTCGTATCA CTGCAAGTTG ATGAAAACGG CTCATTTGCT
GGCTTAAGTT ATGCGTTTTC AAATACCGAA ACCCTACTTA TTCATCCTGA TGAAAAAAAT
CAACTCACCG CTCGCGTGGA CAAAAAGAAA GTCGATACCC GCTTGAACTA CGCGCAAGGC
GAGATTAACA GCAGTTTCTG GAATGCGGGT GTAAAAGCCC ACCTATCTGA AAGTCAAATC
ATGAGCCTAG CGGCGATATT TGGCTGGGAT ATCGATTTTG CTTTAGAAAT TCGCCAAGGT
GACAATTTTA ATGTTGTCTT TGAAGAAAAA TACATAGACG GTGAATTCGT GGAATACGGC
GATATTGTTT CAGCTGAATT TACCAACGGT GGCAACACCT TTACCGCTAT CCGTTACTCT
GATGGCAATT ATTACACCCC AGAAGGGCGT AGTATGCGTA AAAGTTTTTT ACGCGCACCG
GTTAGCTTTA AATACATCAG CTCTAGTTTC ACAAAACGTC GCTTTCACCC AGTCCAAAAA
CGCTGGAAAG CCCACCGTGG CGTAGATTAC GCAGCAAATC GCGGCACCCC CGTAATGGCT
GCTGGCGATG GTAAGGTTAT TCGCTCTTCA TACGATAAAT ACAATGGTAA TCACGTTTTT
ATTCAACACG GTGAAAAGTA CGTGACCAAA TATTTGCACT TTACCAAGCG TAAAGTCAAA
GTGGGACAAA CTGTTAAGCA AGGCGATGTT ATCGGCACTG TTGGCTCTAC AGGGTTAGCT
TCTGGCCCGC ATTTACATTA CGAATTTTTA GTGGATGGCG TACATCGCAA CCCTAGAACC
GTTTCTTTGC CTAAAGCACT CCCCATCGCC AAGAAAGAGC GCAGCGCATT CGAACTCGTG
GCAAAAGAGC AACTTGAGTT ACTGACTAAT AGCAAGCGCA TTATGTTGGC GATGAATTAG
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| Protein sequence | MYELNFPVVK KAFSQLPKAH KWAVASLASI VLILALFPSD RASASRNTEA ALLEIGKRYE
LPISTDHLSV SSEEHVSDDV EWNTYQVKRG DTLAKIFKRA GLSARDTYNV SSAGELAKML
LKIRPGQLVS LQVDENGSFA GLSYAFSNTE TLLIHPDEKN QLTARVDKKK VDTRLNYAQG
EINSSFWNAG VKAHLSESQI MSLAAIFGWD IDFALEIRQG DNFNVVFEEK YIDGEFVEYG
DIVSAEFTNG GNTFTAIRYS DGNYYTPEGR SMRKSFLRAP VSFKYISSSF TKRRFHPVQK
RWKAHRGVDY AANRGTPVMA AGDGKVIRSS YDKYNGNHVF IQHGEKYVTK YLHFTKRKVK
VGQTVKQGDV IGTVGSTGLA SGPHLHYEFL VDGVHRNPRT VSLPKALPIA KKERSAFELV
AKEQLELLTN SKRIMLAMN
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