Gene Patl_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0512 
Symbol 
ID4173456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp594948 
End bp595445 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content44% 
IMG OID638053514 
ProductAsnC family transcriptional regulator 
Protein accessionYP_660095 
Protein GI109896840 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCTA AGAAAAATAG CCGGCCCCTA GACAGCATAG ATTTGGATAT TCTTGCATCC 
TTGTACGAAG ATGCTCGTAC CACCAATAAA GAAATAGCCA AACGGGTGGG TTTAGCGCCC 
TCATCTTGTC TTGAGCGTAT CAAGCGCCTG CAAGCAGATG AGATCATTCA AGGCGCATCG 
TTACAGATAG ATTTGAATGC CTTAGGCGGT CATATACAAG CGATGATTTC GATTCGATTG 
TCTGATCACA ACCGTTTAGC GGTAGATGAC TTTGTTACTG ACTTATTACC TCAGCCCGAA 
GTGCTTAGCG TGTTTCACAT GGGTGGCAAC ATCGATTTTT TATTGCACGT CACCGTGACT 
GACTCTAGTC ATTTGCGAGA TTTTATATTT AACCAACTTA CCGCTAGGCC TGAAGTGAAC 
CATGTTGAAA GCGCGTTAGT TTACGAGCAC AGATGTTCAC AGCAATTACC TACTTTTTAC 
CCCCAAAGTA CGACCTAA
 
Protein sequence
MMPKKNSRPL DSIDLDILAS LYEDARTTNK EIAKRVGLAP SSCLERIKRL QADEIIQGAS 
LQIDLNALGG HIQAMISIRL SDHNRLAVDD FVTDLLPQPE VLSVFHMGGN IDFLLHVTVT 
DSSHLRDFIF NQLTARPEVN HVESALVYEH RCSQQLPTFY PQSTT