| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0509 |
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| Symbol | |
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| ID | 4173453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 589764 |
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| End bp | 592076 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053511 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_660092 |
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| Protein GI | 109896837 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0256564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG AAATCATTAT CAATAAAGAC GGTATCGAAC AGCTTCCGAT GCGTCAATTC
ACCGAAGAGT CTTACCTCAA TTATTCCATG TACGTCATCA TGGATCGGGC TTTGCCCCAT
ATCGGCGACG GATTAAAGCC AGTGCAGCGG CGTATTGTGT ACGCCATGTC AGAACTTGGC
TTGAGTAACA ATGCTAAGTA TAAAAAGTCG GCGCGTACAG TGGGGGACGT ATTAGGTAAA
TTTCATCCCC ACGGTGATTC TGCCTGTTAT GAGGCTATGG TATTAATGGC GCAGCCATTC
TCTTATCGCT ACCCGCTGGT GGATGGGCAA GGAAACTGGG GGGCGCCAGA CGACCCTAAA
TCATTTGCTG CCATGCGCTA TACCGAATCT CGATTGTCTA AGTTTAGCGA AGTGCTGTTG
ACCGAACTTG GGCAAGGTAC GGTTGATTGG CAACCTAACT TTGATGGCAC GTTAGACGAG
CCCAAAATAT TGCCAGCACG CTTACCGCAT ATTTTGCTCA ATGGTATTAC CGGCATCGCG
GTCGGTATGG CCACTGATAT TCCGCCACAT AATGTACGAG AAGTGGCCAA TGCCTGTGCC
CATTTATTGG ATAATAGCAA AGCGGAATTG CACGAATTAT TGGAGTTTGT ACAAGGGCCT
GATTACCCCA CTGATGCTGA AATAATCACC CCACAAAGCG ACATTCGTAA AATGTATGAA
ACCGGTCGTG GCTCAATTAA AATGCGCGCT GTGTATTATG AAGAAGCTGG CGATATTATT
ATCACGGCGT TGCCACATCA AGCCTCTGGC GGCAAAGTGT TAGAACAAAT CGCGGCCCAG
ATGCAGGCTA AAAAACTGCC TATGGTCAGT GATTTACGTG ATGAGTCGGA TCACGAAAAC
CCAACCCGTT TATTGATCAC ACCGCGCTCA AACCGCGTCG ACGTTGAGCA ATTAATGCAG
CACCTGTTTG CCACCACAGA TTTAGAGAAA AATTACCGCG TCAATATCAA TATGATTGGG
CTAGATGGTC GCCCACAAGT CAAAGACTTG CGCATGATTT TGTCTGAATG GTTGATATTT
AGAAAAGACA CGGTGGTTAG ACGCCTGCAA TATCGATTAG ATAAGGTATT GGCGCGCTTA
CATATTTTAG AAGGCTTGAT GATTGCCTTC CTAAATATTG ACGAAGTTAT TCGTATCATT
CGCTATGAGG ACAAACCAAA GCTTGTCCTG ATGGATACCT TCTCGCTATC AGACATTCAA
GCGGAAGCTA TTCTAGAGTT AAAGCTACGT CATTTAGCCA AGCTTGAAGA AATGAAAATC
AAAGGTGAGC AAGACGAACT GGCCAAAGAG CGTGACGAGC TGCAACTTAT CCTCGGGTCT
GACCGCCGTC TTAAGACCCT GATCAAAAAA GAAATTTTAG CCGCAGCAGA AATGTACGGT
GATGATAGAC GCTCACCGAT TATTGAACGT TCTGAGTCAA AAGCCTTGAG TGAGAAAGAG
CTTATTCCAT CAGAAGCTGT CACCGTTGTA TTGTCAGAAA AAGGTTGGGC ACGTTGCGCT
AAAGGGCATG ATGTAGACGT GGTCGGTTTA AGTTACAAGG CGGGGGATAA GTACCTCGCT
AGCAGCAAAG GACGAAGTAA CCAGCAAGCC GTATTTATGG ATACCTCCGG GCGGGCCTTT
TCCTGTGATG CCCATTTACT GCCCTCAGCC CGAAGCCAAG GTGAGCCCAT AACGGGACGT
TTTAGTATCG TCAGTGGGGA AAGCGTTGAG CACGTGGTAA TGGGACAAGA CGAGCAGCAA
TATCTGATTG CCTCTGATGC GGGCTACGGA TTTGTCGGCA AATTTGCCGA TATGATCAGT
AAAAACCGAG CTGGGAAAGC TTATATTTCT TTACCCAAAG CCGCCAAAAT CATCGCGCCT
CAAGCAGTGC ACGACTTATC CAGTGATTGG TGTTTAGCGA TTTCCAATGA AGGGCGCATG
TTAATGTTCC CGTTACGAGA CTTACCCAGC CTAGGAAAAG GCAAAGGGAA TAAAATTATC
AGTATCCCTT CGGCTAAATC ACAAGCTCGG GAAGAGTTCG TCAAGGTGCT CGCTGTCGTC
CCTCAAGGTG CCAATATAAA AGTATTGGCG GGCAAACGCG GTATGACATT AACCGCTGAC
GACTTAACTC ATTATCAAGG TGAGAGAGGA CGTCGCGGCA ACAAACTCCC CAGAGGCTTA
CAGCGTGTCG ATGGTATTGA AGTTGAAGCG GGTACCGGTG TTAGCGACCA AGCTGACGAT
GCCGGTGAGT TGCCTAATGA GCCATCCCTA TAA
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| Protein sequence | MSQEIIINKD GIEQLPMRQF TEESYLNYSM YVIMDRALPH IGDGLKPVQR RIVYAMSELG
LSNNAKYKKS ARTVGDVLGK FHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTES RLSKFSEVLL TELGQGTVDW QPNFDGTLDE PKILPARLPH ILLNGITGIA
VGMATDIPPH NVREVANACA HLLDNSKAEL HELLEFVQGP DYPTDAEIIT PQSDIRKMYE
TGRGSIKMRA VYYEEAGDII ITALPHQASG GKVLEQIAAQ MQAKKLPMVS DLRDESDHEN
PTRLLITPRS NRVDVEQLMQ HLFATTDLEK NYRVNINMIG LDGRPQVKDL RMILSEWLIF
RKDTVVRRLQ YRLDKVLARL HILEGLMIAF LNIDEVIRII RYEDKPKLVL MDTFSLSDIQ
AEAILELKLR HLAKLEEMKI KGEQDELAKE RDELQLILGS DRRLKTLIKK EILAAAEMYG
DDRRSPIIER SESKALSEKE LIPSEAVTVV LSEKGWARCA KGHDVDVVGL SYKAGDKYLA
SSKGRSNQQA VFMDTSGRAF SCDAHLLPSA RSQGEPITGR FSIVSGESVE HVVMGQDEQQ
YLIASDAGYG FVGKFADMIS KNRAGKAYIS LPKAAKIIAP QAVHDLSSDW CLAISNEGRM
LMFPLRDLPS LGKGKGNKII SIPSAKSQAR EEFVKVLAVV PQGANIKVLA GKRGMTLTAD
DLTHYQGERG RRGNKLPRGL QRVDGIEVEA GTGVSDQADD AGELPNEPSL
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