| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0508 |
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| Symbol | |
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| ID | 4173452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 588566 |
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| End bp | 589681 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053510 |
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| Product | L-sorbosone dehydrogenase (SNDH) |
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| Protein accession | YP_660091 |
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| Protein GI | 109896836 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0760317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACTTC GCCGTTTGAT TCTACTTTCT TTTGTCAGTT TTGCTGGCAT AGCTAAGTCG
TTACCGTTAG AAAAGCTCTC TCTACCTACT GGGTACAGCA TTGAAGTCTA CGCCTCAGAT
GTCAAAAATG CTCGCCAGAT GGCGCTCAGT GATAATGGCA TTTTATTTGT TGGTAGCCGA
GACAGTGGGC TTTTAACTGC TGTTGTGGAT AAAGACCAAG ACGGCAATGT GGACGAGGTA
CTGCAAATTG CCAAAGATTT AACCATGCCC TCAGGGCTCA CCATCAAAGA TGGTGACTTA
TATGTGGCAG AGGTCAGCCG AATTCTGAAA TACGCCAATA TTGAGCAGAA TTTTCGCGAA
TTACCTGAGC CTGAAGTGGT CATTGATGGC TTGCCTGATA AAAAACACCA TGGCTGGAAG
AACATTGATT TTGGGCCAGA TGATTGGTTA TACGTTCCTG TTGGCGCGCC ATGTAATATA
TGTGAAACCA ATGGCGGTGA GAAGTTTGAT AATCCTGAAT TTGCCTCGAT TTTAAAATAC
AACTTAAAAA CCAAAGAGCG AGTTTGGGTG GCAAAAGGGG TAAGAAATAG TGTGGGGTTT
GATTGGCACC CGCAAACCAA CCAAATGTGG TTTAGCGATA ATGGCCGCGA CATGATGGGA
GACGATATTC CACCGTGTGA AATCAATCGT GTTGACGAGA TAGGTGCTCA CTATGGTTAC
CCTTATTATC ATGGTGGCAC CATAGCCGAC CCAGAGTTCG GTACAGACAA AAATGCCGCA
GACTATGTTG CACCCGCATT GAATTTGGGC GCGCATGTTG CGCCATTAGG TATCCATTTT
TACCATGGTG ATATGTTTCC AGCAGATGCC CAAAACAATC TGTTTGTTGC TGAACATGGC
TCATGGAACC GGAGCAAAAA GTCTGGTTAC AAAGTCATGC GAGCGATATT GAAAGATAAC
GAAATTGTTG AATATCAACC TTTCATTGAA GGCTGGTTGC AAGCGGATGA AACATCGTGG
GGGCGCCCAG TTGCTATGCT CACCATGCCA GATGGTAGCT TGTTAGTATC CGATGATTTC
GCGAATGTTA TTTATAGGGT AACCTACCAG AAGTAA
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| Protein sequence | MILRRLILLS FVSFAGIAKS LPLEKLSLPT GYSIEVYASD VKNARQMALS DNGILFVGSR
DSGLLTAVVD KDQDGNVDEV LQIAKDLTMP SGLTIKDGDL YVAEVSRILK YANIEQNFRE
LPEPEVVIDG LPDKKHHGWK NIDFGPDDWL YVPVGAPCNI CETNGGEKFD NPEFASILKY
NLKTKERVWV AKGVRNSVGF DWHPQTNQMW FSDNGRDMMG DDIPPCEINR VDEIGAHYGY
PYYHGGTIAD PEFGTDKNAA DYVAPALNLG AHVAPLGIHF YHGDMFPADA QNNLFVAEHG
SWNRSKKSGY KVMRAILKDN EIVEYQPFIE GWLQADETSW GRPVAMLTMP DGSLLVSDDF
ANVIYRVTYQ K
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