Gene Patl_0506 details

Gene Information

• Locus tag: Patl_0506
• ID: 4173450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 584541
• End bp: 585221
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053508
• Product: hypothetical protein
• Protein accession: YP_660089
• Protein GI: 109896834

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGATG TAATACAGAT CCGCGCTTCT GCGAAACGTA ATGTTCTCAC CACCAGTTTG 
TTCGGTGTTA CGGGTATTTT TGTGGCTGCA GGTATTTTCG CTTGGCTGCC CGAGGCATTC 
TTTTTGGCCG GAGTGTTTGT GACGAGTGCT TCAATAGTGG CACTGTTGAT TGCTTGGTTT 
AAATTTCGTG AGCCTATTTT CAGCTTAGAA TTATCCCATG ATTCTATTTG TTACCAGCAT 
CGAAAAGGAC AATGGCATGT GAGTTGGCAC AATATCCAAC GTATTGACGT CCCTCGCGCG 
CATCGAGACT TAGCACTTGA AGATTTGAGC TTGGTGGGCA TAAAACTTAA AGACTATCGG 
CCCTTTTTAA CCACAACACC GATCAAGTTG ATGATTCATT TGTTGATGGA ACAGCGTTCT 
CTGCTGTTAT TAGGGGATAA AGCTGACAGT GCCTCAGGAC TGAGTTTCAG TGCTAACCTA 
GTAGAAGATG ATAAACATAA GTTACCCGAT GGAACTGTGC TTACTGGCAC ACAGGCCATG 
CTAGCTAACC GAATGACAAA GTTGCGTGAA CGATTAGGTT ACGACTTGTA TATCAACGTG 
TCTGAGCTTG ACCGCAGTGA GCAAGAGTTC GTTACGCTAT TGCGTGAGTG CCAGGAGTTT 
GTGCAGAACC AACAGAAATA A 

 

Protein sequence

MQDVIQIRAS AKRNVLTTSL FGVTGIFVAA GIFAWLPEAF FLAGVFVTSA SIVALLIAWF 
KFREPIFSLE LSHDSICYQH RKGQWHVSWH NIQRIDVPRA HRDLALEDLS LVGIKLKDYR 
PFLTTTPIKL MIHLLMEQRS LLLLGDKADS ASGLSFSANL VEDDKHKLPD GTVLTGTQAM 
LANRMTKLRE RLGYDLYINV SELDRSEQEF VTLLRECQEF VQNQQK