| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0505 |
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| Symbol | |
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| ID | 4173449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 581408 |
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| End bp | 584083 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053507 |
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| Product | PPE repeat-containing protein |
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| Protein accession | YP_660088 |
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| Protein GI | 109896833 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTAG TAAACAAATA CAATTTCAGT AAATTTGCCC AACGTATGTT ACTTATCGCC
GCCTCTGGCA TCGGTGCACT TAGCGCAGGC ACTGCTAGTG CTGAATCATT GTGGGTAGCT
TCAGCCCAAG CTAAATTTAG CGCTGAGGAC ACCGCGCCAA AAGTTGCCGT CGTTAAAGGT
AACTATCAGT CCCTTGCCAG CGACTCATTG CAACAACGTT TCTCAGATAA AACCGCCGCT
ATCACCTTAG CTCTGCCCTT GCCGGATGGC AGCTACGCTG ACTTTACACT CACGCCTTCT
CGCGTGATGT CAGACGATTT AGCTGCACGC TACCCTCAGT TTATGTCATA CGATGCGGTG
CAAGTGAATG CTCCGCAAAA TGTTGGCCGT TTCAGCCTGA CTCATAAAGG GCTGACGGGT
ATATTTCGTC AAAATGGTCA GTGGGCGTTA TTAAGCCCAG TTTACGAAAA AAACGATGAA
CAATATGTTA GCTATTATTA CCTCGACTCT GACGGCAAAA GCCTGCTACC ACAAGGTATG
GATGATTCAA TTGGCACCCT TTCAGCGCAG GAAGAAACCA ACACCGATTT AATCACCGCT
CAGAAAACCA CAGGCGACAC CCTAACCACC TACCGTTTAG CCCTCAGTGC AACCGGTGAA
TACACTCAAG CAGTAGGTGG AACAAAAGCC GACGCAGTGG CAGAAATGAT CACTTTGGTC
AACCGAGTGA ATCAGATTTT ACTGGTGGAT ACTGCCATAC AATTTGAGTT GATTGATAAC
GAAGATATTA TTTATACAGA TGCCGCTACT GACCCCTTTA CCAACAGTGA TGCAAACGAA
GATTTAGACA CCAATCAACA AGTCATTGAT GATGCTGTAG GCTCTAGCAA TTACGATATA
GGGCATTTAC TTGCCACTAA TCCAGGCGGA CTAGCGTTCG TTGGCGTAGT ATGTTTGAGT
ACTCACAAAG CCAGAGGATA TACAGGCAAT ACTTCTCCCC AAGGGGAGCG CTTCTATATT
GATTTGGTGA TCCATGAATT GGGCCACCAA CTGGATGCGG AACACTCTTT TAACGCACAA
GATTTTGACT CCTGTGACGA AGAACAGCGC AGTAGTTCGA GCGCATTTGA ACCGGGCAGT
GGCTCTACAA TTATGTCCTA CGCAGGTATA TGCGGCACTC AGAATTTACA AAATACCAGT
TCACCTTATT TCCACGCGGG CTCAGTAGAA CAAATACGTG ACTATGTTGA GACAGGACGC
GGCCGACTTT GTGGCACCAC AAGCAGTTTG AACAATGCTG CGCCACAAGT CTCTTTGACC
TCAACAAATT ACACTATTCC AGCGAACACA CCTTTTTTAC TCGATGCACA AGCAACTGAT
GATGAAACAC TAACCTATAC CTGGGAGCAA ATTGATGCCG GTGGCGACAC GGGTGGAACG
ACAACCGCCA GCGACATGCG CAGCGATAAT GGCGCGAATC CACTGTTTCG CTCGTACTCT
GCAGTCAGTG AGAGCTATCG TTATTTCCCT GCTTTAGAGG ATGTGTTAGA GAATACCGTT
AGTTTTGGTG AGGCTTACCC TACAACCGAT CGAGAACTAA ACTTTCGCGT TACGGTAAAA
GACAATAGAG GCGGCGTAGA CACTGCTGAC ATTATGCTGA GTGTCACAAA TACGGGCACC
GCATTTGCGG TCACTCAACC CACAGCGACC AGTGTTTGGC AAGGTAATGC AGCTCAAACC
ATTGCCTGGA ATACCGCCAG TACACAAAAT GCACCGATAA GTTGCCCCTC GGTAGACATC
ACAGCAGATT TAGACGGTGA TAATACTTTC GACAGTATTC TTATAAGCGA CACCCCCAAT
GATGGCGAAC AAGTGGTATT TTCACCAAAC ACCAACACCA CCAACGCACG TATAAAAGTC
AGTTGTGCCG ACAACGTCTT TTACGCTGTA AACCCTGCCA ACTTTGCGAT TACCCAAGGA
GCCTCAAATG TCGCCCCTGT CATTGATGGT CAGTCTGTAT TAAGTCTCAA TGAAGACGAC
ACACTTACCC TGACGCTAAC TGACTTACAA GTCACGGACC CAGACTCTAG CTACCCAGAT
AACTTCACCT TAGCATTGCA AGCAGGCAGT AATTACAGCA TCGAAGATGG TGTAACCCTA
GTACCTGATG CGAACTTTAG CGGCGAGCTG TCAGTCTCGA TCACGGTCAA TGATGGTATC
GAAGACTCAA GTGCTTTCCC ATTGGTCGTG AATGTTGCCC CAGTCAATGA TGCCCCACAG
GCAAGTGACG ACAGCCAAAC CGTTGAGCAG GATAGCGCAG CTGCGCTTAT CAGTGTGCTA
AATAATGATA CGGATATTGA CGGCGACAAC CTCAGTATCA GCGACATAAA TTACACTGGC
TCAGGGACTG TTAGCATCAG TGGCAACCAA GTACGTTATC AACCAGCTAG TGGGTTTTCG
GGCAATGAAA GCCTGACTTA CATTGTAAGT GATGGCATTG CCACCGACAG TGCAACCCTG
ACGATAACGG TTACAGCAAC GCCTACGACT ACTGCGCCAA CGACTGGCAG TAGTTCTGGT
GGCGGTGGCT CGTTTAGTTA CCTGTGGCTT GGTTTAGTGA GCGTGATGAT GTTCATAGGC
AGGCGTTCAC GTAAGTCAGC AAAATGCGCT TGTTAA
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| Protein sequence | MQVVNKYNFS KFAQRMLLIA ASGIGALSAG TASAESLWVA SAQAKFSAED TAPKVAVVKG
NYQSLASDSL QQRFSDKTAA ITLALPLPDG SYADFTLTPS RVMSDDLAAR YPQFMSYDAV
QVNAPQNVGR FSLTHKGLTG IFRQNGQWAL LSPVYEKNDE QYVSYYYLDS DGKSLLPQGM
DDSIGTLSAQ EETNTDLITA QKTTGDTLTT YRLALSATGE YTQAVGGTKA DAVAEMITLV
NRVNQILLVD TAIQFELIDN EDIIYTDAAT DPFTNSDANE DLDTNQQVID DAVGSSNYDI
GHLLATNPGG LAFVGVVCLS THKARGYTGN TSPQGERFYI DLVIHELGHQ LDAEHSFNAQ
DFDSCDEEQR SSSSAFEPGS GSTIMSYAGI CGTQNLQNTS SPYFHAGSVE QIRDYVETGR
GRLCGTTSSL NNAAPQVSLT STNYTIPANT PFLLDAQATD DETLTYTWEQ IDAGGDTGGT
TTASDMRSDN GANPLFRSYS AVSESYRYFP ALEDVLENTV SFGEAYPTTD RELNFRVTVK
DNRGGVDTAD IMLSVTNTGT AFAVTQPTAT SVWQGNAAQT IAWNTASTQN APISCPSVDI
TADLDGDNTF DSILISDTPN DGEQVVFSPN TNTTNARIKV SCADNVFYAV NPANFAITQG
ASNVAPVIDG QSVLSLNEDD TLTLTLTDLQ VTDPDSSYPD NFTLALQAGS NYSIEDGVTL
VPDANFSGEL SVSITVNDGI EDSSAFPLVV NVAPVNDAPQ ASDDSQTVEQ DSAAALISVL
NNDTDIDGDN LSISDINYTG SGTVSISGNQ VRYQPASGFS GNESLTYIVS DGIATDSATL
TITVTATPTT TAPTTGSSSG GGGSFSYLWL GLVSVMMFIG RRSRKSAKCA C
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