| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0496 |
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| Symbol | |
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| ID | 4172723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 574297 |
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| End bp | 575301 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053499 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_660080 |
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| Protein GI | 109896825 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCG AAGGTAGTCA TATTCTTTCC GTTAATCAGT TCGACCGTGA ATCGATAGAA
CGCGTATTCG ATGTCGCTAA TCAAATGGAG CCCTATGCAA AACGCCAAAA ACGGACCACG
GTACTTGATG GTGCGATCCT CGGAAATTTA TTTTTCGAGC CTAGCACACG TACTAGAGTC
AGTTTCGGTA CCGCTTTTAA CTTACTCGGT GGTGAGGTAC GTGAAACCAC TGGTATGAGT
AACTCCGCAT TGGCCAAAGG CGAGTCTTTG TACGATACCG CTCGTGTACT CAGTGGCTAC
TCCGATATCA TCACTATGCG CCACCCTGAT TCAGGCTCAG TCGCTGAATT TGCCCAAGGT
AGTCGTGTGC CAGTGATAAA TGGTGGTGAT GGCGCTAACG AGCACCCTAC GCAAGCCCTT
CTTGATTTAT ATACTATTCA AAAAGAACTG CTATACCATG GCGGCAACAT TGACGGCCTG
CATATCGCCA TGATTGGTGA TCTGAAATAT GGCCGAACCG TACACTCGTT AAGTAAATTA
CTTTGTCTGT TCAAAAATAT TCGCTTTACG CTTATTTCAC CCAAAGAGCT GGCAATGCCG
GATGCGATTC TAAGTGCCAT TGAAAATGCG GGGCACAGCT ACACTATCAG TGAAACCCTA
GAGGGTAACT TTGATGCGGA TATCTGTTAT CAAACCCGAG TGCAAGAAGA ACGTTTTGGC
TCACAAGAAG AGGCAAATTT GTACCGGGGG AAATTCCGCT TGAATCAGCA AATTTACACC
AAGCACTTTC AATCTAAAAC AGTGATTATG CATCCGTTAC CGCGAGATTC ACGCACGGAA
GCCAATGAGT TAGACAACGA TTTAAATATG AACCCAAATC TGGCCATCTT TCGCCAAACC
GACAATGGCG TACTGGTAAG AATGGCGTTG TTTGCCTTGA CCTTAGGGGT TGAAAATATC
GTTAGCAAAT TCGACAAAGA AGTGCATTGG TACAGCGGCC ACTAG
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| Protein sequence | MKFEGSHILS VNQFDRESIE RVFDVANQME PYAKRQKRTT VLDGAILGNL FFEPSTRTRV
SFGTAFNLLG GEVRETTGMS NSALAKGESL YDTARVLSGY SDIITMRHPD SGSVAEFAQG
SRVPVINGGD GANEHPTQAL LDLYTIQKEL LYHGGNIDGL HIAMIGDLKY GRTVHSLSKL
LCLFKNIRFT LISPKELAMP DAILSAIENA GHSYTISETL EGNFDADICY QTRVQEERFG
SQEEANLYRG KFRLNQQIYT KHFQSKTVIM HPLPRDSRTE ANELDNDLNM NPNLAIFRQT
DNGVLVRMAL FALTLGVENI VSKFDKEVHW YSGH
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