Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0493 |
Symbol | |
ID | 4172720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 570525 |
End bp | 571445 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053496 |
Product | Dyp-type peroxidase family protein |
Protein accession | YP_660077 |
Protein GI | 109896822 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2837] Predicted iron-dependent peroxidase |
TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACAAC CACAAAAAGG GATTTGTGCT GAAGCAAGCT TGCATGCCCT GTATTTACTG CTCAATGTGA ACGATGATGA TGATTCAGTC ATGCGCATCA AGATCGCACA AATTGTCGAC TTATTTGCCC ATTATGATGA AGAGCATTAT GAGGCAATGG TCACCGGCGT TGTTGCCATA GGCAGTAGCT ATTGGCACGA CGTTTATCCG GGATTAATTC CTGTCGAATT AGCGCCGTTT CCTGATATGC ACTGCGATGA CCGCAGTGCC CCTGTCGCAC CTTGTGATTT ATTTATTCAA ATTCGCGCTG ACAGGGCGGA TATTTGCCAT GCCCTTGCCA TGGAAATCAT GCGTTTGCTT GGCAGCCATG TGGATTTGAT TGAAGATATA CGCGGATTCA GATATTTAGA TGGTCGTGAT TTAACTGGAT TTATTTACGC CGACGACAAC CCCAAAGGTA TGCATAAGTT AGATATCGCG TTAGTGGGGG AGCTCGATCC AGACTTTGCT GGTGGCAGTT ACATACATGT GCAAAGGTAC CGTCACAATA TTGCTAAGTG GGAGCAATTG TCTGCCTATC ATCAAGAATA CATAATGGGC CGTAAAAAAT CGGATAACAG CCCCCTGAGT GATGCCTTTA AATCACCTCG TAGTCATTAC GATTGTACCC AGATTACAGA CAATGAAAGC CGTCCTATGC GGATTTTGCG CCAGAGCATG CCCTATGGAG ATATGCATGT GCAGGGGCTG TTTTTTGTCA GTTGTGCTCG CAGTCCTAAG CCATTCGAGC ATATGCTACG CAATATGATC ATGAATGATG AAAACGGTGA ATATGACCGC TTTTTGGATT ATACCAGTGC TGAAACTGGC GCTGCGTTTT TTGCTCCATC GCTTACCTTT ATTAAGCAGC GCGCAAATTA A
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Protein sequence | MPQPQKGICA EASLHALYLL LNVNDDDDSV MRIKIAQIVD LFAHYDEEHY EAMVTGVVAI GSSYWHDVYP GLIPVELAPF PDMHCDDRSA PVAPCDLFIQ IRADRADICH ALAMEIMRLL GSHVDLIEDI RGFRYLDGRD LTGFIYADDN PKGMHKLDIA LVGELDPDFA GGSYIHVQRY RHNIAKWEQL SAYHQEYIMG RKKSDNSPLS DAFKSPRSHY DCTQITDNES RPMRILRQSM PYGDMHVQGL FFVSCARSPK PFEHMLRNMI MNDENGEYDR FLDYTSAETG AAFFAPSLTF IKQRAN
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