| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0476 |
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| Symbol | rplP |
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| ID | 4171819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 551710 |
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| End bp | 552120 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053479 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_660060 |
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| Protein GI | 109896805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0462501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTACAAC CTAAACGTAT GAAGTTCCGT AAAATGCACA AAGGTCGTAA CCGTGGCTAT
GCCGCTGGTG ACAGTGTGAG TTTTGGAACG TTCGGACTAA AATCCGTTGG CCGTGGTCGT
ATGACTGCTC GCCAAATCGA AGCAGCTCGT CGTGCTATGA CACGTGCCGT TAAGCGTCAA
GGTAAAATTT GGATTCGAGT TTTCCCTGAC AAGCCAATTA CTGAGAAGCC TCTTGAAGTG
CGTCAAGGTA AAGGTAAAGG TAACGTTGAA TACTGGGTTT GCCAAATTCA ACCAGGTCGT
GTTCTATATG AAATGGAAGG TGTTCCAGAG TCAGTAGCTC GCGAAGCGTT TGAATTGGCC
GCGTCAAAAC TGCCGTTTAA AACCACCTTT GTAACTCGGA CGGTGATGTA A
|
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| Protein sequence | MLQPKRMKFR KMHKGRNRGY AAGDSVSFGT FGLKSVGRGR MTARQIEAAR RAMTRAVKRQ
GKIWIRVFPD KPITEKPLEV RQGKGKGNVE YWVCQIQPGR VLYEMEGVPE SVAREAFELA
ASKLPFKTTF VTRTVM
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