| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0470 |
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| Symbol | rplD |
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| ID | 4171813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 548622 |
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| End bp | 549227 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053473 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_660054 |
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| Protein GI | 109896799 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000163865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAG TATTGAAAGA TGCGCAAAGC GCTCTTGAAG TATCCGAAGC AACCTTTGGA
CGTGAATTTA ACGAAGCACT AGTACATCAA GTAGTAGTTG CATTCGGTGC AGGCGCCCGT
CAGGGTTCTA AAGCACAAAA AACACGCTCT GAAGTTCGTG GTGGTGGTGC CAAACCTTGG
CGTCAAAAAG GAACAGGTCG TGCCCGTGCT GGTACTATCC GTAGTCCTAT CTGGCGTTCT
GGTGGTGTAA CATTCGCTGC TAAGCCACAG GATCACAGCC AAAAGGTTAA CAAGAAGATG
TACCGCGGTG CGATTCAAAG CATCCTGTCT GAATTGGTAC GTCAAGAACG TTTAATCGTG
GTTGAAAAGT TTTCAGTTGA AGCGCCTAAA ACTAAGGAAT TACTTTCTAA GTTAAATGGC
CTTGAGCTAA GTGATGTACT AATCGTAACG TCTGAAGTTG ATGAGAACTT GTTCTTAGCA
GCTCGCAACT TATACAAAGT TGACGTACGT GATGTACAAG GCATTGACCC AGTCAGCCTG
ATCGCATTCG AAAAAGTGTT GATAACTGCT GATGCAGTGA AAGCATTAGA GGAGGCGTTA
GCATGA
|
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| Protein sequence | MELVLKDAQS ALEVSEATFG REFNEALVHQ VVVAFGAGAR QGSKAQKTRS EVRGGGAKPW
RQKGTGRARA GTIRSPIWRS GGVTFAAKPQ DHSQKVNKKM YRGAIQSILS ELVRQERLIV
VEKFSVEAPK TKELLSKLNG LELSDVLIVT SEVDENLFLA ARNLYKVDVR DVQGIDPVSL
IAFEKVLITA DAVKALEEAL A
|
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