Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0464 |
Symbol | |
ID | 4171807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 538040 |
End bp | 540127 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638053467 |
Product | elongation factor G |
Protein accession | YP_660048 |
Protein GI | 109896793 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000919416 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATT TAGCACGTTA CAGAAACATC GGTATTTTCG CCCACGTTGA TGCGGGTAAA ACTACCACAA CAGAACGAAT TTTGAAGCTT ACCGGTCAAA TACACAAAAC CGGTGAAGTA CATGATGGTG AATCTACCAC TGACTTCATG GAACAAGAAG CTGAGCGCGG TATTACTATC CAATCAGCTG CGGTTAGTTG TTTTTGGAAA GACCACCGTT TCAACGTTAT CGATACTCCT GGGCACGTTG ACTTCACTGT TGAAGTTTAC CGCTCACTTA AAGTACTTGA TGGCGGCATC GGTGTTTTCT GTGGTTCTGG TGGTGTTGAG CCTCAGTCAG AAACTAACTG GCGTTATGCG AATGACTCAG AAGTTGCACG TATTATCTTC GTAAACAAAT TGGACCGTAT GGGTGCTGAC TTCTACCGCG TAGTTGACCA AACCAAAAAA GTACTTGGTG CTAATCCACT CGTTATGGTT CTACCTATCG GTATCGAGGA TGACTTCGTT GGTGTGGTTG ACCTTCTTAC TCGCAAAGCA TTCATTTGGG ATGACACTGG TCTTCCTGAA AACTACGAAA TCACAGATGT TCCTGCGGAC ATGGTTGATA AAGTAGAAGA ATACCGTGAA ATGTTGATCG AAACTGCTGT TGAGCAAGAC GATGACCTAA TGATGGCTTA CATGGACGGC GAAGAGCCTT CTATGGAAGA CATTAAACGT TGTATCCGTA AAGGTACGCG TACTATGGAC TTCTTCCCGA CTTACTGTGG TTCTGCATTC AAAAACAAAG GTGTTCAAAA CATTCTTGAT GCTGTTGTTG ATTACCTACC TAGTCCTACA GAAGTTGACC CTCAACCTCT TACAGACGAA GAAGGTGAGC CGAATGGTAA GTACGCAATT GTTTCACCAG ATGAAACATT TAAAGCGTTA GCGTTCAAAA TTACAGATGA CCGTTTTGGT GCTCTTACTT TCGTACGTAT CTATTCTGGT ACGCTTAAGA AAGGCGACAC CATACTTAAT GCTGCAACAG GTAAAACTGA ACGTATTGGT CGTATGTGTG AAATGCAAGC CGATGACCGT AATGAGTTAA CTAGCGCTCA AGCTGGTGAC ATCATCGCAA TCGTTGGTAT GAAGAGTAAC GTTCAAACAG GTCACACTTT ATGTGATCCT AAAGATCCAA TCATCCTAGA AGCGATGGTA TTCCCTGAAC CAGTAATCTC TATCTCTGTT ACACCTAAAG ATAAAGGTTC AACTGAGAAG ATGGGTCTAG CTATCGGTAA AATGGTTGCA GAAGATCCTA CATTCCGTGT TGAAACTGAC CAAGATTCAG GTGAAACAAT CCTATCTGGT ATGGGCGAGC TTCACTTGGA CATCAAAGTA GATATTCTTA AGCGTACTTA CGGTGTTGAA TTAGAAGTCG GTGAGCCTCA AGTTGCATAC CGTGAAACGA TCACTCAAGA AGTTGAAGAT TCTTACACTC ATAAGAAACA ATCTGGTGGT TCTGGTCAGT TCGGTAAAAT CGATTACCGT ATCAAGCCTG GTGAGCCTAA TAGTGGTTTC ACATTCAGCT CAGTGGTTGT GGGTGGTAAT GTACCAAAAG AATTCTTCCC TGCTATCGAA AAAGGTTTTG CAAGCATGAT GGAGTCTGGT GTTCTTGCTG GCTTCCCTGT GTTAGATGTT GAGGTTGAGC TTTATGACGG TGGATTCCAC GCAGTGGATT CATCAGCAGT TGCATTTGAA ATCGCTGCTA AAGGCGCATT CCGTCAATCA ATCCCTAAAG CGGGTCCTCA GTTGATTGAA CCTATCATGA AAGTTGACGT GTTCACGCCA GACGACCATG TTGGTGATGT TATCGGTGAC TTGAACCGTC GTCGCGGTAT GATCAAAGAT CAAGAAGCAG GCGTTACTGG TGTTCGCGTT AAGGCTGATA TCCCTCTTTC AGAAATGTTT GGTTATATCG GTTCATTGCG TACAATGACG TCAGGTCGTG GTCAGTTCTC TATGGAGTTC TCGCACTACT CACCTTGTCC GAACAACGTC GCTGAAAAAG TAATTGCTGA TACTAAAGAG CGTAACGCTA AGAAGTAA
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Protein sequence | MKDLARYRNI GIFAHVDAGK TTTTERILKL TGQIHKTGEV HDGESTTDFM EQEAERGITI QSAAVSCFWK DHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA NDSEVARIIF VNKLDRMGAD FYRVVDQTKK VLGANPLVMV LPIGIEDDFV GVVDLLTRKA FIWDDTGLPE NYEITDVPAD MVDKVEEYRE MLIETAVEQD DDLMMAYMDG EEPSMEDIKR CIRKGTRTMD FFPTYCGSAF KNKGVQNILD AVVDYLPSPT EVDPQPLTDE EGEPNGKYAI VSPDETFKAL AFKITDDRFG ALTFVRIYSG TLKKGDTILN AATGKTERIG RMCEMQADDR NELTSAQAGD IIAIVGMKSN VQTGHTLCDP KDPIILEAMV FPEPVISISV TPKDKGSTEK MGLAIGKMVA EDPTFRVETD QDSGETILSG MGELHLDIKV DILKRTYGVE LEVGEPQVAY RETITQEVED SYTHKKQSGG SGQFGKIDYR IKPGEPNSGF TFSSVVVGGN VPKEFFPAIE KGFASMMESG VLAGFPVLDV EVELYDGGFH AVDSSAVAFE IAAKGAFRQS IPKAGPQLIE PIMKVDVFTP DDHVGDVIGD LNRRRGMIKD QEAGVTGVRV KADIPLSEMF GYIGSLRTMT SGRGQFSMEF SHYSPCPNNV AEKVIADTKE RNAKK
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