| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0456 |
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| Symbol | |
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| ID | 4173229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 530401 |
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| End bp | 531009 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053459 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_660040 |
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| Protein GI | 109896785 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
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| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.18357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACAAT ATCTTAGTTT ATTTATCCGT TCTATCTTCC TAGAAAACAT GGCGTTGTTC
TATTTCTTGG GTATGTGTAC TTTCTTGGCC GTATCAAAGA AAGTAAAAAC GGCGATGGGT
CTGGGTGTTG CGGTTATCGT AGTATTGACG ATTTCTGTAC CTGTAAACCA ACTTGTTTAT
GCCAACATTC TTGCGCCTGG CGCACTAGGT TGGGCTGGCT TTCCTGACAC CGATTTGAGC
TTCTTAAGCT TTTTGACTTT CATTGGTGTA ATCGCTGCTT TGGTTCAAAT TCTTGAAATG
ACGCTAGATA AGTTTTTCCC TGCGCTATAC AACGCGTTAG GTATTTTCTT ACCTTTGATC
ACTGTTAACT GTGCAATTTT TGGTGGCGTA GCATTCGCTG TTCAGCGTGA TTACACCTTC
ACCGAAAGTA TCTTCTACGG TGCGGGTAGT GGTGCAGGTT GGGCATTAGC GATCACATTA
CTTGCGGCAG TGCGTGAGAA ACTTAAGTAT GCAGATATGC CAGAAGGCGT GCGTGGTTTA
GGTTCCGTAT TTATGATTGC AGGATTAATG GCGTTGGGCT TCCAGTCATT TTCTGGCGTA
TCAATTTAA
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| Protein sequence | MEQYLSLFIR SIFLENMALF YFLGMCTFLA VSKKVKTAMG LGVAVIVVLT ISVPVNQLVY
ANILAPGALG WAGFPDTDLS FLSFLTFIGV IAALVQILEM TLDKFFPALY NALGIFLPLI
TVNCAIFGGV AFAVQRDYTF TESIFYGAGS GAGWALAITL LAAVREKLKY ADMPEGVRGL
GSVFMIAGLM ALGFQSFSGV SI
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