| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0454 |
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| Symbol | |
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| ID | 4173227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 528991 |
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| End bp | 529752 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053457 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit C |
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| Protein accession | YP_660038 |
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| Protein GI | 109896783 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
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| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.274195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGCTA AAAAAGAAAC ATTAGGCAAA ACGGTCGGCG TTGTTATCGC CGTATGTTTA
GTTTGTTCGG TTATTGTATC AACGGCGGCG GTTAGCCTAC GTTCACAACA ACAAGCAAAT
GCGAAGCTAG ATAAGCAAAC TAATATCTTA GAATCTGCCG GCTTACTTGA AGCCGGGCAG
AGTAAAGAGC AAATCGCAGC GACCTATGCA GATCGCGTAC AAGAAAAGTT TGTTGATTTA
GCAACGGGCC AGTACGTTGA GAAGGAAGCT GGCTATGATA TGTATAAAGC AGCGCGTGAC
CCTGAAGAAA GTATCAAGCC TGTGCCTGAT ACCGCTGGGA TTTTACGTCG CCCTAACGTT
GCTAGTGTGT ATTTAATTTC TAATCCTGAC GGCGAAGTAA CACGTATCGT GTTGCCTATT
AACGGCAGTG GCTTATGGAA CTTAATGTAT GCCATGTTAG CGGTTGACTC TGACGGTAAT
ACCGTTCGTG AGCTAGTGTA TTACGATCAG CAAGAAACGC CTGGTCTTGG CGGTGAAGTT
CAGAACCCTG AATGGAAAGC GAAGTGGGAC GGTAAGAAAT TGTATAAAAA TGGCGAAGTG
GCTATTGATG TGACCAAGGG CGCAAAAGCG AATGACCCTT ATGAAGTTGA TGCTTTGTCA
GGTGCGACGT TAACCAGTAA TGGCGTACAA AATACACTTG ATTATTGGCT GGGTGAGAAT
GGCTTCGGTC CTTACCTTAA AAACCAACCA TGGAAATCGT GA
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| Protein sequence | MSAKKETLGK TVGVVIAVCL VCSVIVSTAA VSLRSQQQAN AKLDKQTNIL ESAGLLEAGQ
SKEQIAATYA DRVQEKFVDL ATGQYVEKEA GYDMYKAARD PEESIKPVPD TAGILRRPNV
ASVYLISNPD GEVTRIVLPI NGSGLWNLMY AMLAVDSDGN TVRELVYYDQ QETPGLGGEV
QNPEWKAKWD GKKLYKNGEV AIDVTKGAKA NDPYEVDALS GATLTSNGVQ NTLDYWLGEN
GFGPYLKNQP WKS
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