| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0452 |
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| Symbol | |
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| ID | 4173225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 526413 |
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| End bp | 527786 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053455 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit A |
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| Protein accession | YP_660036 |
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| Protein GI | 109896781 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
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| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.441683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTATTG ACTTTAGAGT AGTGCTATTG CGTATGATTA AAATCAAGAA AGGGTTAGAT
CTTCCGATTA CGGGAGCGCC AGAACAAAAG ATTCATGACG GTCCAGCGAT TACTAAGGTT
GCTGTGCTAG GTGAAGAGTA CATTGGAATG CGTCCAACCA TGCATGTTCA GGTTGGCGAT
AAAGTGCAGA AAGGCCAGAT GCTTTTCGAA GACAAAAAGA ATCCAGGTGT GAAGTTCACA
GCACCTGCTT CTGGTAGTGT CATCGAAGTT AACCGTGGCG CAAAACGTGT TTTGCAGTCA
GTGGTTATTC AAGTTGAAGG TGATGACGCA GTAGAATTCG ACAAATATGC CGAATCTGAA
CTGTCATCTA TAGCGGCCGA CAAAGTGCAA CACAATCTAG TGGAATCTGG ATTATGGACT
GCACTGCGTA CGCGTCCTTA TAGCAAAACC CCTGCTCTTG ACAGCAAACC TCACTCCATA
TTCGTTAGCG CGATGGATAC TAATCCATTA GCTGGCGATC CTGCCGTTAT TATTGCCCCG
CGTAGTGCAG ATTTTATCAA TGGTTTACGT GTTATCTCGC GTTTAACTGA AGGTAAGGTA
TTTGTGAGTA AAGCGCCCGG TGCTGATATT CCAGTAGGGG ACGTGAAAGC TGACGTGAAC
GAATTTGCCG GACCACATCC TGCAGGTTTA GTGGGCACGC ATATTCATCA CCTAGATACT
GTTGGTGCGG CTAAGAAAGT TTGGCATATC AACTACCAAG ATGTGATTGC GGTTGGTGCG
TTATTTACAA CAGGTAAGTT GAATAACGAG CGTGTTATTG CCCTAGGCGG CCCCGCTGCT
AAGAACCCGC GTTTAATTAA AACCGTGTTA GGTGCAAGTG TCAGTGAGTT GACCTCGGGT
GAAACTACTG AAGGCGAAGT TCGCACAATT TCAGGCTCGG TTTTACAAGG TAATAACGCC
CATGGCGTTC ATGGTTATGT GGGTCGCTAC CACGTTCAGC TTTCACTTCT TAGTGAAGGC
CGTGAAAAAG AATTCCTAGG TTGGATTAAG CCAGGTGCCA ATCAGCACTC TGTGACCCGT
GCATACCTTG CACATTTTAG CCCTAAGAAA TTATTCAATA TGACAACCAC CACTAATGGT
TCAGACCGTT CTATGGTGCC AATTGGTAAC TATGAGCGCG TTATGCCGTT AGATATTTTA
CCAACATTAT TGTTGCGTGA TTTGATTTCT GGTGACACTG ACAGTGCTCA AACATTAGGT
TGTTTAGAGT TAGACGAAGA AGATTTAGCG CTTTGTACCT ATGTTTGCCC TGGTAAATAT
AATTACGGGC CGATCTTGCG TGAAAGTCTA GACAAGATTG AGAAAGAGGG TTAA
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| Protein sequence | MCIDFRVVLL RMIKIKKGLD LPITGAPEQK IHDGPAITKV AVLGEEYIGM RPTMHVQVGD
KVQKGQMLFE DKKNPGVKFT APASGSVIEV NRGAKRVLQS VVIQVEGDDA VEFDKYAESE
LSSIAADKVQ HNLVESGLWT ALRTRPYSKT PALDSKPHSI FVSAMDTNPL AGDPAVIIAP
RSADFINGLR VISRLTEGKV FVSKAPGADI PVGDVKADVN EFAGPHPAGL VGTHIHHLDT
VGAAKKVWHI NYQDVIAVGA LFTTGKLNNE RVIALGGPAA KNPRLIKTVL GASVSELTSG
ETTEGEVRTI SGSVLQGNNA HGVHGYVGRY HVQLSLLSEG REKEFLGWIK PGANQHSVTR
AYLAHFSPKK LFNMTTTTNG SDRSMVPIGN YERVMPLDIL PTLLLRDLIS GDTDSAQTLG
CLELDEEDLA LCTYVCPGKY NYGPILRESL DKIEKEG
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