Gene Patl_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0448 
Symbol 
ID4173221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp523431 
End bp524063 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID638053451 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_660032 
Protein GI109896777 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAACAAT CTAGTTTATT CCCGTCAGGT TCTTCTGATG AGGCTGAAAT ACTGCCTTTG 
CCAGACGGAG ACTTTCGCTA TTTTCAACAT TTTTTGTCCA GTCAAGAAGC GGATAATTAT 
TACAAGCGGC TTCTTGAGTC ATTAGCTTGG CGACAAGATG ATATCAAAAT GTACGGTAAA 
CAGGTTAAAA TCCCGCGCTT GCAAGCATGG TATGGTGATG AGGACGCGCT TTATCAGTAT 
TCAGGCCTCA ATTTGCCACC TATTCCTTGG ACCGAAGAAT TACATGCCCT GAAAGTACAG 
TGTGAAAAAG CCAGTGAAAG CGTTTTTAAC TCTGTATTGG CTAATTGTTA TCGTGACGGT 
CAGGACAGTA TGGCTTGGCA TAGTGATGAC GAACCTGAGT TAGGTACTCG ACCAGTTATT 
GCTTCGTTGA GTTTGGGGCA GGTGCGAAAT TTTGATTTGA AGCATCGAAC GAGTGGGCAA 
AGACACAGGC TGCCTTTGGA GCACGGCAGT TTGTTCATTA TGGCTGGCAA TTCCCAAACA 
CATTGGTTGC ACAGCTTAGC TAAAACGACA AAGTCGCTGG CACCACGTAT TAATCTAACA 
TTTCGTTTAG TCACACCAAA TTTGCGTCGC TAA
 
Protein sequence
MQQSSLFPSG SSDEAEILPL PDGDFRYFQH FLSSQEADNY YKRLLESLAW RQDDIKMYGK 
QVKIPRLQAW YGDEDALYQY SGLNLPPIPW TEELHALKVQ CEKASESVFN SVLANCYRDG 
QDSMAWHSDD EPELGTRPVI ASLSLGQVRN FDLKHRTSGQ RHRLPLEHGS LFIMAGNSQT 
HWLHSLAKTT KSLAPRINLT FRLVTPNLRR