| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0447 |
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| Symbol | |
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| ID | 4173220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 522251 |
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| End bp | 523405 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053450 |
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| Product | rRNA (guanine-N(2)-)-methyltransferase |
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| Protein accession | YP_660031 |
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| Protein GI | 109896776 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.389747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG AACTTACGCT TTTAGACCAT AGCTACGAAT TATTGAGATA TCCTGCTGAA
AATCAACATG TCAGCTGGCA AGCATGGGAT TCAGCTGATG AATACTTGAT GGAATACGTG
GCGCAGAATA TCACGGATCT TAATGGGCTC AATATCCATA TATACAACGA TGATTTCGGT
GCGCTAGGCG TTTGGTTTGC TACAAATAAC GCCCCCCTGT GGATAAGCGA CTCTTTTGTC
GCACATAAGG CTCTGGCCTT AAATCTTGAA CGCAACCATC TCCCGATCGA AAATGTTAAC
GTCCAGAACA GTCTGTATAA AGCCAATCAA AAGGCTGATC TGGTGTTAAT TAAAGTCCCT
AAAACCCTCG CTTTATTAGA ACAGCAACTC ATTGATTTAC AATCGTCAGT TACCCCTGAA
ACACGCATCA TCGCAGCAGG CAAAGCCAAT GCCATTCAAA AATCAACGTT GGCATTGTTT
GAAAAGCACC TTGGGCTAAC CACCACATCC TTAGCTAAGA AAAAGTCACG CTTGATATTT
TGCCAATACG ACGGCGTTAA GCAAAGTGTT AGCCCCTATC CTACAAAATG GAAAACCGAC
AACACACAAT TTATAATGAG CAACCTTGCA AACGTTTTCT CCCGTCAACA GTTAGATATA
GGCGCGCGGG TATTACTTGC CCATCTGCCA GATGCTAATC ACAAGTGCAT TGTCGATCTA
GGTTGCGGTA ACGGGGTGTT AGGCCTACAT GTATTGCACA AATCACCGGG CGCTCACGTC
ATTTTTGTAG ACGAGTCTTT TATGGCCATT GCTTCTGCAA AAATGAATAT CGAGCAAAAC
ATGCCAGACA AACTCGATCA GTGTAAGTTT ATTGTGAGTA ACTGTTTAGA CGAGTGCCTA
TCATCAGGCG AAAATGAGGC GACAGTTGAT ATCGTTCTAT GTAACCCCCC TTTTCATCAA
CAAAATACCA TTACCGATCA TATCGCCCTG CAAATGTTCA AAGACAGTAA GCGTATTCTT
AAACATGCTG GGGAGTTGCG CGTTGTTGGC AATCGGCATT TAGATTATCC ACAAACGATT
AAGCGCCTTT TCGGTCACTA CAAGGTACTT GCAAGTGACC GAAAATTCAG TATTTTGTCA
GCAATTAAAA AGTAA
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| Protein sequence | MKTELTLLDH SYELLRYPAE NQHVSWQAWD SADEYLMEYV AQNITDLNGL NIHIYNDDFG
ALGVWFATNN APLWISDSFV AHKALALNLE RNHLPIENVN VQNSLYKANQ KADLVLIKVP
KTLALLEQQL IDLQSSVTPE TRIIAAGKAN AIQKSTLALF EKHLGLTTTS LAKKKSRLIF
CQYDGVKQSV SPYPTKWKTD NTQFIMSNLA NVFSRQQLDI GARVLLAHLP DANHKCIVDL
GCGNGVLGLH VLHKSPGAHV IFVDESFMAI ASAKMNIEQN MPDKLDQCKF IVSNCLDECL
SSGENEATVD IVLCNPPFHQ QNTITDHIAL QMFKDSKRIL KHAGELRVVG NRHLDYPQTI
KRLFGHYKVL ASDRKFSILS AIKK
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