| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0446 |
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| Symbol | |
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| ID | 4173219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 521641 |
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| End bp | 522237 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053449 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_660030 |
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| Protein GI | 109896775 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.10549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCGCG CCCTGTGTAT CAGCATTTTT ATTATCAGTA TATCTGCCGT TGCTAAGCCA
AAGGACGATG GCAGCCAAAT TCAAGCCGAT AATTTTTATC CTAGGGTAAA AATTGAGACC
TCCATGGGTG ACATCACAGT TGAACTCGAC CGCTCAAAAG CCCCTATCGC GGTAAATAAC
TTTTTACGTT ACGTAGATAA ACGCAGTTAC GAAGACACTA TTTTTCACCG AATAGTGGCT
AATTTTGTAG TTCAAGGCGG AGGGTACGAT GTAGATTTTG CCGAGAAGCC GTCGTTTCCA
AATATAATCA ATGAATCAGG CAATGGTTTG AAAAATGAAA TGTACACCAT TGCCATGGCA
CGCCAGAAAG ACCCGCACTC TTCGAATAGG CAGTTTTTCT TTAATATGAA TGACAACGTC
AGTCTCGATC CAGGTCGTAA CTGGGGCTAT ACCGTTTTTG GCTATGTAGT AGAAGGCACA
GATATTCTCG ATGCCATATC ACTGGTCGAA ACAGACTATG ACACGACTTG GGGTTGGGCT
GACGTACCTG TTGAGCCCGT ACTGATTAAA CGCGTAAGTG TGTTACCGCC CGTCTAA
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| Protein sequence | MLRALCISIF IISISAVAKP KDDGSQIQAD NFYPRVKIET SMGDITVELD RSKAPIAVNN
FLRYVDKRSY EDTIFHRIVA NFVVQGGGYD VDFAEKPSFP NIINESGNGL KNEMYTIAMA
RQKDPHSSNR QFFFNMNDNV SLDPGRNWGY TVFGYVVEGT DILDAISLVE TDYDTTWGWA
DVPVEPVLIK RVSVLPPV
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