Gene Patl_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0445 
Symbol 
ID4173218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp521125 
End bp521655 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content46% 
IMG OID638053448 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_660029 
Protein GI109896774 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.159299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTAA AGTGCCCACA TCTGAGAACC GCTAGGCTAA CCATGCGCCT GTTAACTGAT 
GATGATGCGG AATTCATACT GGGGTTGGTA AATGAACCAA GCTGGATAAA GTACATAGGA
GATAGAAACA TTCACACTCT GGATGACGCC AAACATTATA TTCAAACCGG ACCATTAACC
ATGTATGAGC AGCATGGCTA TTGTCTCAAC CTAGTTGAAC GTTCAGCGGA TAACGTGCCT
GTGGGAATGT GCGGTTTGTT GAAGAGGGAA ACATTGGAAT GGCCAGATAT TGGCTTTGCA
TTTTGCGCTG AGTTTCATGG TCAAGGTTTC GGATATGAAG CTGCTAAAGC CACATTGAAG
CATGCACAAG ATGCACTGGG ATTAACTCAA ATCGCGGCGG TGACCGCACT GGATAACGAC
CCCTCTATAG CACTGCTAAA TAAGCTTGGC TTCGCGCTTG TGAAGCAAAT TGGGTTTGAA
CCACAAGGCG AAGCAAGTCA CTTATTTTTA AAAGCGTTAG ACGGGCGGTA A
 
Protein sequence
MPVKCPHLRT ARLTMRLLTD DDAEFILGLV NEPSWIKYIG DRNIHTLDDA KHYIQTGPLT 
MYEQHGYCLN LVERSADNVP VGMCGLLKRE TLEWPDIGFA FCAEFHGQGF GYEAAKATLK
HAQDALGLTQ IAAVTALDND PSIALLNKLG FALVKQIGFE PQGEASHLFL KALDGR