| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0442 |
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| Symbol | |
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| ID | 4173733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 518341 |
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| End bp | 519324 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053445 |
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| Product | lysyl-tRNA synthetase-related protein GenX |
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| Protein accession | YP_660026 |
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| Protein GI | 109896771 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTG AGCCCAGCCC TTGTTGGCAA CCCACTGCTG ACGTGGCCAC ACTTAAGCAA
AGAGCGGCTA TCATCACTAA TATTCGTCAG TTTTTTGCAC AACGAGATGT GTGGGAAGTA
GAAACGCCCA GCCTTAGTAA TGCAACAGTC AGCGATGTTC ATATGCGCGT GTTTGACACG
CAATTTGTTG ATCCTATGTC ACCACAGCAG CGAACCTTGT ATCTGCAAAC CTCTCCAGAA
TATGCCATGA AGCGACTATT ATGTGCCGGC AGTGGTGCGA TCTTTCAAAT TGCCAAAGCG
TTTCGCAATG AGGAGGCAGG CAAACATCAT AATCCCGAAT TTACTATGCT GGAGTGGTAT
CGCCCTGGGT TTGACCATAA TCAGTTAATG GATGAACTTG ATGAGTTGAT GCAATCTGTG
GTGGGCTGCT TGCCTGCAAA GCGTATGAGT TATCAAGACG CTTTTATCCA ATATTTGGCT
ATTGACCCTC TAAGCGCTCC ATTGTCGGCA TTACAAACGA AGGGATGTGA GTTGGGATAC
GAGCATATAT GCCGAGACGA GCAAGACAAA GATACTATTT TGCAGCTGCT GTTTAGCCAC
GAAGTAGAGC CTCATATTGC TAACAAATCC CCATGCTTTA TTTTCGATTT TCCTGCAAGT
CAAGCCGCGT TAGCGCGGGT AAGTGTGCAA GATGAGCGCG TCGCTGAGCG TTTTGAGCTC
TACTATAAAG GATTAGAGCT GGCGAATGGC TTTCATGAAT TGGCCAATGC CCCAGAGCAG
CGTCAACGAT TTGAGCGAGA CAACCAACAA CGAAAATCAG CAGGCTTATC TACTGTACCT
ATCGATGAGC TCTTCTTAGA TGCGCTTGAT GCCGGCTTGC CAGACTGTTC AGGGGTGGCC
GTTGGGGTGG ATAGACTTGT CATGTTGGCA TTAGAAAAGT CAGATATTCA GCATGTACTG
GCGTTTAATT ATCAGAATGC ATAA
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| Protein sequence | MKPEPSPCWQ PTADVATLKQ RAAIITNIRQ FFAQRDVWEV ETPSLSNATV SDVHMRVFDT
QFVDPMSPQQ RTLYLQTSPE YAMKRLLCAG SGAIFQIAKA FRNEEAGKHH NPEFTMLEWY
RPGFDHNQLM DELDELMQSV VGCLPAKRMS YQDAFIQYLA IDPLSAPLSA LQTKGCELGY
EHICRDEQDK DTILQLLFSH EVEPHIANKS PCFIFDFPAS QAALARVSVQ DERVAERFEL
YYKGLELANG FHELANAPEQ RQRFERDNQQ RKSAGLSTVP IDELFLDALD AGLPDCSGVA
VGVDRLVMLA LEKSDIQHVL AFNYQNA
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