| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0440 |
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| Symbol | |
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| ID | 4173731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 516639 |
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| End bp | 517664 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053443 |
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| Product | lysine 2,3-aminomutase YodO family protein |
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| Protein accession | YP_660024 |
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| Protein GI | 109896769 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1509] Lysine 2,3-aminomutase |
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| TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACACAAA TAATACCTAA AAAACTCATT GCTGTAGAGA ATAACTGGCA AAAAGAACTC
TCGAGTGCAT TTTCCGATCC TGTCGCTTTG CTCAAATACC TAGATTTAGA TCCCACTGAG
TTTATCGACG ATATCGCTGC ACGTCGCTTA TTTCCTATGC GCGTGCCTCT CCCGTTCGCA
GCGAGAATAA AAAAAGGTGA CCCGAACGAC GCACTTTTTA AGCAAGTATT TCCAAGCGAA
AAAGAATTTC TAACAGACCT TAATTACGTA CTGGACCCGC TACAAGAACA GCAAAATGAA
AAACCTGGCG TATTACACAA GTATAAAAGT CGTGTACTCC TGCTAGTCCG CGGTGGTTGT
GCCGTCAATT GCCGCTACTG TTTTCGTCGC CACTTCCCCT ATTCCGATAA CCACTTAAAC
AAACATGAGT GGCAAGAAAC ACTCGACTAT ATAAAGCAAG ACAAAAACAT TAACGAAGTC
ATTTATTCTG GCGGCGACCC TTTGATGGCC AAAGATGACT TTTTAGCATG GTTAACCGAT
GAAATAGCTG AAATAACGCA TATCAAACGC ATCAGAATTC ACACTCGATT GCCTGTTGTT
ATCCCTGCTC GTATTACGCC CCAGCTGATA GAGTGGTTTA CTAAAACCCG GCTCAAACCT
GTGATGGTGC TGCACATTAA CCACCCGCAA GAAATCGACT TCGCGTTACA AGAAGTATTG
CAAGAATTAA CAAAGGCGGG GGTAACCTTA CTCAATCAAG GCGTACTGCT AAAAGACATT
AATGACAGTG CGGATGTGCA GGTCGCGTTA AGTGAAAGAC TATTTGATGC CGGTGTGATG
CCTTATTACC TACACGTAAT GGACAAAGTG CAAGGCGCCC AACATTTTGA TCAAGACGAC
AAAATAGCGA AAGACATTAT GGCAAAAATG ATAAAACGCC TACCGGGATT TCTGGTGCCT
AAACTCGTAC GCGAGATAGG CGGCCAACCC GGTAAAACGC CAATTGATTT AAATCTTCAT
CCCTGA
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| Protein sequence | MTQIIPKKLI AVENNWQKEL SSAFSDPVAL LKYLDLDPTE FIDDIAARRL FPMRVPLPFA
ARIKKGDPND ALFKQVFPSE KEFLTDLNYV LDPLQEQQNE KPGVLHKYKS RVLLLVRGGC
AVNCRYCFRR HFPYSDNHLN KHEWQETLDY IKQDKNINEV IYSGGDPLMA KDDFLAWLTD
EIAEITHIKR IRIHTRLPVV IPARITPQLI EWFTKTRLKP VMVLHINHPQ EIDFALQEVL
QELTKAGVTL LNQGVLLKDI NDSADVQVAL SERLFDAGVM PYYLHVMDKV QGAQHFDQDD
KIAKDIMAKM IKRLPGFLVP KLVREIGGQP GKTPIDLNLH P
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