Gene Patl_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0437 
Symbol 
ID4173728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp515663 
End bp516004 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content46% 
IMG OID638053440 
Productsmall multidrug resistance protein 
Protein accessionYP_660021 
Protein GI109896766 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.453624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATAA CGACAGGATA TTGGTACCTA GGGGCGGCCA TTATGGCTGA GGTCATCGGT 
ACCTTGGCAC TTAAAGCTTC TGAGGGTTTT AATAACACCA TCTCTAGTGC GGTATGTGTT
ATCGGCTACG CGACAGCGTT TTATTTTCTG TCTTTAGTGC TAAAAACTGT GCCTGTAGGG
ATTGCTTATG CGATTTGGGC AGGCATGGGC ATAGTGTTGA TTGCCCTTTT CAGCGCGATT
TTCTATAAAG AGTTGCCCGA CTTAGCGGCC ATCGCTGGCA TGAGCTTAAT ACTCTCCGGC
GTTGTTATCA TCAATGTATT TTCAAAAACA ACGGGCCATT AA
 
Protein sequence
MGITTGYWYL GAAIMAEVIG TLALKASEGF NNTISSAVCV IGYATAFYFL SLVLKTVPVG 
IAYAIWAGMG IVLIALFSAI FYKELPDLAA IAGMSLILSG VVIINVFSKT TGH