| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0429 |
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| Symbol | |
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| ID | 4173720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 506675 |
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| End bp | 508288 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053432 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_660013 |
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| Protein GI | 109896758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.321003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGTT TAACTGATAT AAAATTGCCC CTTGATCACC AAGATGCTGA TCTCACCCAA
GCGATACTTG ATAAATTAGG ATGCGGCGCA GAGCAGTTAA CCCAAGTTTC TGTATTTAAA
CGTGGTTTTG ATGCGCGGAA TAAGTTTGAT ATCCAACTGA TTTACACCTT AGACGTGGAC
GTTGCTGAGC AAGAGGCCCT ACTCGCTAAG TTTGAGAACG ATCCCCACGT CAGATTATCA
CCAGATACCC GTTATAAATT TGTGGGTCAT GCACCTGAGG CACTAACTGA GCGTCCAGTC
GTAATCGGTC TTGGACCTTG CGGCTTGTTT GCAGGCCTAT TGTTAGCGCA AATGGGCTTT
AAGCCCATTA TTTTAGAGCG CGGTAAAGAA GTCCGTGAGC GAACTAAAGA CACGTTCGGC
TTTTGGCGTA AAAAGCCGCT TAATACTGAA TCAAATGTAC AGTTCGGCGA AGGCGGCGCA
GGCACATTTT CAGACGGCAA ATTGTACAGC CAAGTGAAAG ATCGCAAGCA TTACGGGCGC
AAAGTGCTTA CCGAGTTTGT TGATGCCGGC GCACCCGATG AAATTATGTA TGTAAGTAAA
CCGCATATCG GTACGTTTAA GCTGGTGGCA ATGGTTGAGC GCATGCGTGC ACAAATTATT
GAACTAGGCG GCGAGATTCG CTTTAGTACC CGAGTCGATG ACGTGCATAT TGAGCAAGGT
CAGTTGACGG GCTTGAGCTT ATCAACGGGG GAACATTTAT CGTGTCGCCA TGCTGTATTA
GCTGTGGGGC ATAGTGCTCG AGACACGTTT AAAATGCTGT ATGAGCGTGA CGTATATATA
GAAGCCAAAC CTTTTTCCGT CGGCTTTAGA ATAGAGCACG AGCAATCCAT GATCGATGAA
TGTCGCTTCG GCCCAAGTGC CGGTCACCCT ATTCTGGGCG CGGCAGATTA CAAACTGGTG
CACCATTGTA AGAATGGCCG TGCGGTATAC AGTTTTTGTA TGTGCCCTGG CGGCACCGTT
GTTGCAGCGG CCTCAGAAGA GGGCCGTGTG GTAACCAATG GCATGAGCCA ATATTCTCGC
CACGAGCGCA ACGCAAATAG CGCCATAGTC GTAGGCATTG AGCCCAACAA AGATTTTCCT
GGGCATCCTT TGGCGGGCAT TGATTTGCAG CGCAAACTTG AAGAGCAAGC CTATGCTCTG
GGCGGCAGCA ATTACGATGC TCCAGCGCAG CTGATTGGCG ATTTTTTGAC AGGAAAAGCA
TCGGCAGAGC TAGGGGATGT GAAACCCTCT TATACGCCAG GGGTAAAACT TACGGACTTA
TCCAAGGTTT TACCGGACTA TGCTATCAGC GCTATTCGTG AAGCTATTCC CGCGTTTGAT
AAGCAAATTA AAGGCTTTGC CAAAGCAGAT GGTTTGTTAA CTGGGGTCGA AACGCGTACC
TCATCGCCTA TTTCCATTAA GCGTGGCGCT GATTTCCAGA GTGTAAATGT TAATGGGCTC
TATCCTGCAG GTGAAGGCGC TGGGTACGCC GGTGGGATTT TATCTGCCGG TATTGATGGC
ATTAAAGTGG CTGAAGCGGT GGCGCTGTCC ATGTTAGCAA GCAGTCACGC GTAG
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| Protein sequence | MLRLTDIKLP LDHQDADLTQ AILDKLGCGA EQLTQVSVFK RGFDARNKFD IQLIYTLDVD
VAEQEALLAK FENDPHVRLS PDTRYKFVGH APEALTERPV VIGLGPCGLF AGLLLAQMGF
KPIILERGKE VRERTKDTFG FWRKKPLNTE SNVQFGEGGA GTFSDGKLYS QVKDRKHYGR
KVLTEFVDAG APDEIMYVSK PHIGTFKLVA MVERMRAQII ELGGEIRFST RVDDVHIEQG
QLTGLSLSTG EHLSCRHAVL AVGHSARDTF KMLYERDVYI EAKPFSVGFR IEHEQSMIDE
CRFGPSAGHP ILGAADYKLV HHCKNGRAVY SFCMCPGGTV VAAASEEGRV VTNGMSQYSR
HERNANSAIV VGIEPNKDFP GHPLAGIDLQ RKLEEQAYAL GGSNYDAPAQ LIGDFLTGKA
SAELGDVKPS YTPGVKLTDL SKVLPDYAIS AIREAIPAFD KQIKGFAKAD GLLTGVETRT
SSPISIKRGA DFQSVNVNGL YPAGEGAGYA GGILSAGIDG IKVAEAVALS MLASSHA
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