| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0428 |
|---|
| Symbol | |
|---|
| ID | 4173719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 506131 |
|---|
| End bp | 506454 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638053431 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
|---|
| Protein accession | YP_660012 |
|---|
| Protein GI | 109896757 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1146] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.496765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTG TAGTCACCGA CAACTGTATA AAATGCAAAT ACACCGATTG TGTTGCCGTA
TGCCCAGTGG ATGCTTTCTT CGAAGGGCCC AATTTTTTGG TGATCGACCC CGACATATGT
ATCGATTGCG CGTTATGCGA GCCAGAATGC CCTGCCAAAG CCATATTTCA GGATGATAAG
TTGCCACCCG GCCAAGAAGC CTTTAACGAG CTCAACGCGG AATTATCGAA AATTTGGCCG
AATATTATCG AAGTCATTCC GCCTCCTGCT GATGCAAAAG AATGGGACGG CGTGCCTAAT
AAAATTGAGT ATTTAGAAAC CTGA
|
|---|
| Protein sequence | MTFVVTDNCI KCKYTDCVAV CPVDAFFEGP NFLVIDPDIC IDCALCEPEC PAKAIFQDDK
LPPGQEAFNE LNAELSKIWP NIIEVIPPPA DAKEWDGVPN KIEYLET
|
|---|
| |