Gene Patl_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0421 
Symbol 
ID4173810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp497687 
End bp498535 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content41% 
IMG OID638053424 
ProductIon transport protein 
Protein accessionYP_660005 
Protein GI109896750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTT TATCCCTACA AGCCAAATTT ATTCGTATTC GTTCGAACAA GCTGTTCGAG 
ATTTTTGTGA TTTCGGTGAT CATATTTTCC GCCCTGTTAG TGGGCGCGAA AACCTATGAA
ATGTCCGTGA CCATGTACCA CGTGACACAG TTTTTAGATT GGTTTATCAG CGCGTTCTTC
TTAACTGAAA TTACCATTCG GTTTTTAGCT GAAGAGCGAA AGCGGGATTT CTTTAAGAAC
TTCTGGAATA TATTCGATAC CTTGATCGTT ATTGTCAGCC TTATCCCCGC TGAAGACGCT
GATTTGGCCG TTATCGCTCG TCTGGTCAGA GTATTTAGGG TATTGCGGAT GATTTCTATC
ATCCCTGAGT TACGCATACT TTTAGTCTCT TTGGTAAAAG CCTTGCCTCA ACTTGGTTAC
GTTATGCTAC TGATGTTCAT CATCTTTTAT ATCTATGCAG CGATAGGTAG CACCTTATTT
GAGAGCATTA ATCCAGACCT TTGGGGGGAT ATCGCCATTT CATTATTGAC CTTGTTTAGA
GTCATGACGT TCGAAGATTG GACCGATGTC ATGTATGAAA CAATGGAAGT TTACCCATTG
AGTTGGGTGT TCTATCTGAC CTTTATTTTC TTCACCGCCT TTGCTTTTTT GAATATGGTT
ATTGGCATAG TCGTCAGTGT AATGGAGCAG GAGAATGAAT TGGCGCGCAA ACAAAAGGCC
AAAGAAGATG CTGCTGAGCA CGATTTAGAA GAAGAGCCGA CGCTTAGTGA TTTGCTGGTG
CATATCAAAG ATTTACAGCT TCAGGTTAAG CAGTTGTCTC CACATACTAT GAAACAGGAG
AAAGAATAA
 
Protein sequence
MNALSLQAKF IRIRSNKLFE IFVISVIIFS ALLVGAKTYE MSVTMYHVTQ FLDWFISAFF 
LTEITIRFLA EERKRDFFKN FWNIFDTLIV IVSLIPAEDA DLAVIARLVR VFRVLRMISI
IPELRILLVS LVKALPQLGY VMLLMFIIFY IYAAIGSTLF ESINPDLWGD IAISLLTLFR
VMTFEDWTDV MYETMEVYPL SWVFYLTFIF FTAFAFLNMV IGIVVSVMEQ ENELARKQKA
KEDAAEHDLE EEPTLSDLLV HIKDLQLQVK QLSPHTMKQE KE