Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0421 |
Symbol | |
ID | 4173810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 497687 |
End bp | 498535 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638053424 |
Product | Ion transport protein |
Protein accession | YP_660005 |
Protein GI | 109896750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTT TATCCCTACA AGCCAAATTT ATTCGTATTC GTTCGAACAA GCTGTTCGAG ATTTTTGTGA TTTCGGTGAT CATATTTTCC GCCCTGTTAG TGGGCGCGAA AACCTATGAA ATGTCCGTGA CCATGTACCA CGTGACACAG TTTTTAGATT GGTTTATCAG CGCGTTCTTC TTAACTGAAA TTACCATTCG GTTTTTAGCT GAAGAGCGAA AGCGGGATTT CTTTAAGAAC TTCTGGAATA TATTCGATAC CTTGATCGTT ATTGTCAGCC TTATCCCCGC TGAAGACGCT GATTTGGCCG TTATCGCTCG TCTGGTCAGA GTATTTAGGG TATTGCGGAT GATTTCTATC ATCCCTGAGT TACGCATACT TTTAGTCTCT TTGGTAAAAG CCTTGCCTCA ACTTGGTTAC GTTATGCTAC TGATGTTCAT CATCTTTTAT ATCTATGCAG CGATAGGTAG CACCTTATTT GAGAGCATTA ATCCAGACCT TTGGGGGGAT ATCGCCATTT CATTATTGAC CTTGTTTAGA GTCATGACGT TCGAAGATTG GACCGATGTC ATGTATGAAA CAATGGAAGT TTACCCATTG AGTTGGGTGT TCTATCTGAC CTTTATTTTC TTCACCGCCT TTGCTTTTTT GAATATGGTT ATTGGCATAG TCGTCAGTGT AATGGAGCAG GAGAATGAAT TGGCGCGCAA ACAAAAGGCC AAAGAAGATG CTGCTGAGCA CGATTTAGAA GAAGAGCCGA CGCTTAGTGA TTTGCTGGTG CATATCAAAG ATTTACAGCT TCAGGTTAAG CAGTTGTCTC CACATACTAT GAAACAGGAG AAAGAATAA
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Protein sequence | MNALSLQAKF IRIRSNKLFE IFVISVIIFS ALLVGAKTYE MSVTMYHVTQ FLDWFISAFF LTEITIRFLA EERKRDFFKN FWNIFDTLIV IVSLIPAEDA DLAVIARLVR VFRVLRMISI IPELRILLVS LVKALPQLGY VMLLMFIIFY IYAAIGSTLF ESINPDLWGD IAISLLTLFR VMTFEDWTDV MYETMEVYPL SWVFYLTFIF FTAFAFLNMV IGIVVSVMEQ ENELARKQKA KEDAAEHDLE EEPTLSDLLV HIKDLQLQVK QLSPHTMKQE KE
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