| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0410 |
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| Symbol | |
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| ID | 4173799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 482576 |
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| End bp | 483394 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053413 |
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| Product | tryptophan 2 3-dioxygenase (vermilion)-like |
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| Protein accession | YP_659994 |
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| Protein GI | 109896739 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC CTGTAACGCC CGATACTATT TTTCGCCAAA AGTACCATGC CCTACTTGAT
AAACCAGAGA TGCTTGATTA CGGCACTTAT TTACATTGTC AGCAGTTACT GAGTGCGCAA
AAACCGTTAA CCGAGCTGTG CAATGGCGAC GAGTTACAGT TTCAAATAGT GCATCAAGTG
GAAGAGTTGT GGATGAAACT CGCCATTTAT ACGCTGGTGG ATGTATTGGA ATTCATGCAG
CAAGAAAACA CCTTACGAGT GGTGACTTTG ATGAAGCGAG TCAGTTTTAT TCAGCGCATG
ATGAGTCAGC AATTGGATTT ACTCGAAACC ATGTCCCCAA AAGAGTATCA GCAAATTCGT
TTGCAACTTG GCAATGGTAG CGGCCAAGAG TCACCTGGTT TTCGTACGTT ATTGAAAATG
CCAACCGACT TATGGAGCGT GTTCAACGAG CAATACTTAG TAGGGCGAAA TAAAAACATC
GAGCAAGTAT ACGATAGCCA ATACAGTCAC GACGAAAGTT ACGTTGTGGC CGAGTGCTTA
GCTGAATTTG ACGAGCAATT ACAAAAGTTT CGTAGCCTGC ATATTTTTTT AATTCAACGT
TCAATTGGCC TTGAGGCTAA GTCGTTGAAA GGGCGAGCCG TGACGCTATT GGAAAATGGC
GCGAAACATC GATTTTTCCC TGAATTGTGG CGGGTGCGTA GCAGCATGAC GGACAGCTGG
GGCAGCGCTT ATGGTGAAGT GCGAGAGTCA ATCCATGAGG TTAATAACCA AGTCGGTGGA
GGTTGCCCAT TTCATCAAAA TCCTAGTGAG GCCCTATAG
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| Protein sequence | MNKPVTPDTI FRQKYHALLD KPEMLDYGTY LHCQQLLSAQ KPLTELCNGD ELQFQIVHQV
EELWMKLAIY TLVDVLEFMQ QENTLRVVTL MKRVSFIQRM MSQQLDLLET MSPKEYQQIR
LQLGNGSGQE SPGFRTLLKM PTDLWSVFNE QYLVGRNKNI EQVYDSQYSH DESYVVAECL
AEFDEQLQKF RSLHIFLIQR SIGLEAKSLK GRAVTLLENG AKHRFFPELW RVRSSMTDSW
GSAYGEVRES IHEVNNQVGG GCPFHQNPSE AL
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