Gene Patl_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0407 
Symbol 
ID4173796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp480642 
End bp480914 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content46% 
IMG OID638053410 
Producthypothetical protein 
Protein accessionYP_659991 
Protein GI109896736 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACTTGC GTATTTATAC ACAACCCAAA GCGTCTCGTG ACGAAGTGGT GGGCCTCCAC 
GGTGATGAGC TTAAGGTTGC GATCACCGCA CCGCCTGTTG ACGGTAAAGC TAATACGCAT
TTGATTAAAT ATTTAGCCAA GCAGTGCGGC GTGGCTAAAT CGAAAGTGGT GATTACCAAA
GGCCAATTAA ACCGGCACAA AACAGTGCTT ATTTCAAAGC CGCTAATCAT ACCTAAGGCC
ATTCAACAAC ATGTCGCAGA TCACAGTAGT TAA
 
Protein sequence
MHLRIYTQPK ASRDEVVGLH GDELKVAITA PPVDGKANTH LIKYLAKQCG VAKSKVVITK 
GQLNRHKTVL ISKPLIIPKA IQQHVADHSS