| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0405 |
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| Symbol | |
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| ID | 4173794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 478069 |
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| End bp | 479721 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053408 |
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| Product | peptidase M28 |
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| Protein accession | YP_659989 |
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| Protein GI | 109896734 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.446061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGCT CAATGTTACA CCATAAGTTT TACAAACTTG TTAAAGCCAG TGCTATGCTA
GGCCTTGTTT TGGCGCCCTT TTCGCTAAGT GCTCAAGATA AAGAGCACGA CGTTAATCTC
ATCAACGTGG CACACCATAT CGAGACGCTA GCCTCTGATA CCTTTCAAGG AAGAGGACCC
CTAACGGAGG GGGAAACCTT AACGATTAAC TATTTAGCCA AGCAGTATCA AGCGATGGGG
TTGCAGGGCG GGAACCCACA TGCACAGAAG TCGTCACCCG TAGCACAATT CCTACAACCT
GTGCCCATGG CGCAGATTAC GCCTGACCAA AACATGCGTT TACAAATAGG TGAGCTGTCT
TTTCTCGCAG GAAGCGACTT CACCGCACGT ACCGAACAGA TGAACCCACA GATAACCCTT
AACGATTCTG AATTAGTATT TGTCGGTTAC GGGATCAACG CACCTGAGTA TCAATGGAAC
GATTACGCCA ATGTAGATGT GAGGGGCAAG ACGGTTATCG TGTTAGTTAA TGACCCAGGC
TTTGCCACAC AGAACCCAAG TGTGTTTACT GGCAATGCGA TGACTTACTA CGGTCGCTGG
ACATACAAGT ACGAAGAAGC AACTCGTCAG GGAGCAAAAG CCGTGCTGAT TGTACATGAA
ACTGCGCCAG CAGCTTACCC ATGGAGTGTG GTAGAAAGCT CAAACACGGG TAGCAAGTAT
ACATTGGTTG ATAACGAGCA AAATAAATCC AAGTTACCGA TTATGGGTTG GATACAGTTG
GCCGCAACAG AGCAAGTGTT CGAACAGTCA GGCCTCAATT ATCAACAACT TAAAGCACAA
GCATTGCAGA GCAATTTTAG TCCAGTGACG TTGAAGCAAA CTGCCAATTT GCGTCTTAAA
AACACCATTA GCCAAGCGAC GTCACACAAT GTACTAGCAA CAATTACCGG CAGTAAATAC
CCTGACGAAT ACGTATTGGT AGGCGCACAC TGGGATCATT TTGGTACTAA ACAAACCGCC
GATGGCGATA TTATTTATAA TGGCGCCGTA GACAATGCTT CTGGTGTTGC TGGCACATTA
GAAATGGCGC GTATGCTCAA GGCACAACAT GATGTTAAAC CATTCGAACG TTCCATTTTA
TTCATTAATT TCACCGCAGA AGAAACGGGG TTGATTGGCT CAGAGCAATT CTCAAAAGGG
GATATCATCC CTACCAAGAA GATGGTTGCC TTGCTTAACA TTGATGGTAT GAACGTGTTG
GATAAAGTGG ATTATATTCT GCAGTACGGT GACGGTTTAT CCGACATGGA AGATTACCTT
GCAAACGCAG CCAATGCGCA AGGGCGGCGA GTAAAGCTTG ATCCTCGCCC CCAGAACGGC
TTGTTTTTCC GCTCTGATCA TTTTTCAATG GCTAAACAAG GTGTTCCGAG CTTGTTGTTC
ATGAGCTTAG GGGACACAGA CCCTGATTAT ATCGCCCATA AATATCATAA AGCAGCAGAT
GACTTTTCAG CTGATTGGTC ACTGGGTGGC GTAGAGCAAG ACATTAAATT GATGGTCAAT
ATTACCGCGA CGTTAGCAAA CTCGAGAGAC TGGCCAAAGT GGAAGATGGC CTCTGACTTT
AAAGCGAGCC GTGAAGCTGA CTTAGCCAAG TAA
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| Protein sequence | MNCSMLHHKF YKLVKASAML GLVLAPFSLS AQDKEHDVNL INVAHHIETL ASDTFQGRGP
LTEGETLTIN YLAKQYQAMG LQGGNPHAQK SSPVAQFLQP VPMAQITPDQ NMRLQIGELS
FLAGSDFTAR TEQMNPQITL NDSELVFVGY GINAPEYQWN DYANVDVRGK TVIVLVNDPG
FATQNPSVFT GNAMTYYGRW TYKYEEATRQ GAKAVLIVHE TAPAAYPWSV VESSNTGSKY
TLVDNEQNKS KLPIMGWIQL AATEQVFEQS GLNYQQLKAQ ALQSNFSPVT LKQTANLRLK
NTISQATSHN VLATITGSKY PDEYVLVGAH WDHFGTKQTA DGDIIYNGAV DNASGVAGTL
EMARMLKAQH DVKPFERSIL FINFTAEETG LIGSEQFSKG DIIPTKKMVA LLNIDGMNVL
DKVDYILQYG DGLSDMEDYL ANAANAQGRR VKLDPRPQNG LFFRSDHFSM AKQGVPSLLF
MSLGDTDPDY IAHKYHKAAD DFSADWSLGG VEQDIKLMVN ITATLANSRD WPKWKMASDF
KASREADLAK
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