| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0403 |
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| Symbol | |
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| ID | 4173082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 473437 |
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| End bp | 476646 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053406 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_659987 |
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| Protein GI | 109896732 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACAG AAGATTCCGC TCCTCGCCCA GATGTTCCTC ACGAAGACCC TGAGCTACCA
AACCCCTTCG AGCCTAAGCA AACGGGTTTA ATCGCGTTTT TTGCCAATAA TTCAGTAGCC
GCCAACTTGA TGATGATTTT TATCATTATT ATGGGGGTGT TTAGCTACTT TACGATCCAG
CGCCAAATGT TTCCGAACAT TGAAATTAAC TACATTAATA TCAGTGCTGT GTACCGTGGT
GCCTCGCCTC AAGAGATCGA AGAAAGTATT TTGATCAAAA TTGAAGAGTC ACTAAAGGAC
ATCACCGAAA TCAAGAAAGC GACTTCAAGG GCATTCCGTG GTAGTGGCCG AGTAACCTTA
GAAATACAGG AAAATAAAGA ACTCACCGAT GTGCTTGATA AGGTAAAAGC GCGGGTTGAT
AGTATTGCGA CTTTCCCTGC AGATATGGAG CCGCCGGACA TTTCACAAAT TGAGTTCCAA
CAAGATGTGA TTGAAATGTC TCTAGTGGGT GACCTACCTA TTACGCAGCT AAAACCTATC
GCTAAAAAAA TTGAAGATGA ACTCCTTCAT CTCAGTAATA TTTCACTGGT GAGCGTGGAT
GCACCAGAAG ATGAAATTGC GATTGAAATT CAGCCGGATG TATTGCGTAA ATACAACCTC
ACTTTAGGGG ATGTGCAGCT CGCAATACAA AATTATTCAG CCAACATATC CGCTGGCGAG
CTTCGTACTG ATTCAGGCAT AGTCGCCGTT CGTGTTGAAA ACCAAATGTA CAGTGGCGAC
GAGTTTCGCA GGATCCCAAT AAAAATCAGT GAAACGGGTG CTAAAGTCTA TTTAGGCGAC
GTAGCCACCA TTGAGGATGG ATTTGAAGAA GGCCAGCGTT ACTATAAATA TTCTGGTGTA
AACGCCATAT ATATGTCGGT AAAGGCCACC AAAGATCAGA GCACCATTCC GGTATCAAAA
ACCGTAAAAG AATATATTGA GATGCGCAAT AAGACCTTAC CCGCAGGCTT GCAGCTCAAA
GTCCTGGTGG ATATGACGTA CTACCTCAAT GCTCGTCTAG ACATGATGCT CAGCAATTTA
TTTCAGGGTG CTATTTTGGT GGCAATTATG CTCACCATTT TCTTGCGATT CAGGCTCGCA
TTCTGGGTTA TGCTCGGTCT ACCCGTGTGC TTTTTAGGCG CCATCATGAT GATGCCGGTT
TTTGGAGTCA CTATTAATAT CCTGTCACTT TTCGCATTTA TTATGGTGCT AGGGATAGTG
GTGGACGACG CCATTGTCAT AGGCGAAAGC GCATACAGTG AAATTGAAGA AAGAGGCGGC
GGCGCTGAGA GTGTTATCCG CGGGGCGAAA CGGGTGGCAA CGCCTGCCAC CTTCGGCGTA
CTGACCACCA TTGCAGTATT TGCACCGGCC TTGTTTTCCA CCGGCCCTGA AGGTCAGTTT
TTCTACGTAA TCGCCTGTGT GGTCATTTTA TGTCTGGTCT TTAGCCTCAT AGAGTCAAAA
CTGATCCTGC CGGCTCACTT AGCCCACATG AAGTTTACCC CAGTGAAAGA AACGAGTTGG
CGTGCCCGCT TTAACCAACG CTTCTTTGGT TTCGTAAACG GAAAATACAA ACGCTTTGTA
GAAAGATGCA CCGAATGGCG CTGGTTCGTT TTTTGTATCT TTATTGCTGT GCTGGTTATC
AGTTGGGGGT TGGTGTCTGC CAACTACGTA CGCATGATCC CGTCACCCAA GGTGCCTCAT
GACTTTCCGG GTATCTCGTT TGAAATGAAT GAAAACGTGC CAGATGAAGC GGTAATCAAC
GCTTTGATCA CCATAGAAAG TATGGTCATC AACGTAGATA AACAAATCAT CGAAGAATAC
GGCAGTTCGA TGATGCGCGA CATTATGGTA TTCAACCGTG GTCGCACTGA AGGTCGGGTA
CAAGTTCCCT TGGTTGACGA AGAAGACCGT CATTTTGACG CGTTTGAGCT TGCTAGGCGT
TGGCGCGAAC AATTACCTGA AATTCCAGGT ATGAAGTCAA TTACTATCAT CGATGATATT
AATGGCGGCG GCAATGACGA CGGTGAATTT GGTTACATGC TATTTGGCAG TGACATAGAT
ACCCTAAACG CTGCGGGGCG TGAGTTTATC TCAATGTTGC AGCAAACAAA TGGACTGTTT
GATATCAGTT CGTCAATCGA CCCTGCTAGC AAAGAAGTAC AAATGCAATT GCTGCCTGTG
GCTTACGACT TAGGCTTAAA CCTAGCCGAC ATTGCGCGCC AAGTTGGCGC CAGTTTTTAC
GGTGGTGAAG CCCAGCGGGT GATCCGCGGC GGTGACGAAG TGCGCGTAAT GGTGCGCTAC
CCCAAGCTAA CCCGGGAACG TTTTGCCGAG TTAAAATACG CGGTTATTAC CACGCCTGCT
GGCAGGGAGG TCATGCTTGG GGATGTAGTG AGCCTGACCG AAAAACCGGG GATCAACTAC
ATCCGTCGTG AAGGCGGATA CCGAAGCGTG TATGTGTTTG GCTCAATTGA TGAAGAAGAA
GTAGAGCCAA ATGAGGTAGT GCAGACGGTA GAAGAAGATC TCTTGCCTCT AATGAAAGAA
AAGTTCCCAG GGGTAAAAAC CGAACTAGGT GGCACCATTG AAGAGCAGCA AGCACAGCAA
AGCCAGCAGC TTATGTTCTT GGTGGCAGGG TTAATCATGG TCTACATCCT GCTCGCAGCA
CCGCTTAAAA GTTACGGCCA ACCGCTTATT ATCATGTCTG TTATTCCCTT TAGCTTAACG
GGTGCTATTT GGGGGCATTT CTTGTTTGGT ATAGATCTAA GCATGATGTC GACCTTCGGC
ATTATCGCCG CCGCAGGGGT GGTAATAAAT GACAGCCTGG TTATGACAGA CTTTGTTAAC
CAACAACGTG CTATGGGCGT TCGCATTAAA GATTCAGTGG TTAACGCTGG TTGCGCTCGC
TTCAGGGCAA TCACCTTAAC ATCAATCACC ACGTTTGCCG GTGTATTGCC GATCATGTTC
GAAACCAGCC TACAGGCACG GTTCGTTATT CCCATGGCGG TCGCGTTGGG ATTTGCGGTA
ATGTACGCGA CTATGGTGAC ACTTATACTC GTGCCTTGCT TGTATTTGAT ACTCGAGGAT
ATTAAGAATA TTTTCAGAGC TATTTTTGCT GCGATTGGTC GCTTGTTTAG CCGCAAGCGC
GAGAAGCATC AAGCAATAAA GAATAGCTAA
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| Protein sequence | MSTEDSAPRP DVPHEDPELP NPFEPKQTGL IAFFANNSVA ANLMMIFIII MGVFSYFTIQ
RQMFPNIEIN YINISAVYRG ASPQEIEESI LIKIEESLKD ITEIKKATSR AFRGSGRVTL
EIQENKELTD VLDKVKARVD SIATFPADME PPDISQIEFQ QDVIEMSLVG DLPITQLKPI
AKKIEDELLH LSNISLVSVD APEDEIAIEI QPDVLRKYNL TLGDVQLAIQ NYSANISAGE
LRTDSGIVAV RVENQMYSGD EFRRIPIKIS ETGAKVYLGD VATIEDGFEE GQRYYKYSGV
NAIYMSVKAT KDQSTIPVSK TVKEYIEMRN KTLPAGLQLK VLVDMTYYLN ARLDMMLSNL
FQGAILVAIM LTIFLRFRLA FWVMLGLPVC FLGAIMMMPV FGVTINILSL FAFIMVLGIV
VDDAIVIGES AYSEIEERGG GAESVIRGAK RVATPATFGV LTTIAVFAPA LFSTGPEGQF
FYVIACVVIL CLVFSLIESK LILPAHLAHM KFTPVKETSW RARFNQRFFG FVNGKYKRFV
ERCTEWRWFV FCIFIAVLVI SWGLVSANYV RMIPSPKVPH DFPGISFEMN ENVPDEAVIN
ALITIESMVI NVDKQIIEEY GSSMMRDIMV FNRGRTEGRV QVPLVDEEDR HFDAFELARR
WREQLPEIPG MKSITIIDDI NGGGNDDGEF GYMLFGSDID TLNAAGREFI SMLQQTNGLF
DISSSIDPAS KEVQMQLLPV AYDLGLNLAD IARQVGASFY GGEAQRVIRG GDEVRVMVRY
PKLTRERFAE LKYAVITTPA GREVMLGDVV SLTEKPGINY IRREGGYRSV YVFGSIDEEE
VEPNEVVQTV EEDLLPLMKE KFPGVKTELG GTIEEQQAQQ SQQLMFLVAG LIMVYILLAA
PLKSYGQPLI IMSVIPFSLT GAIWGHFLFG IDLSMMSTFG IIAAAGVVIN DSLVMTDFVN
QQRAMGVRIK DSVVNAGCAR FRAITLTSIT TFAGVLPIMF ETSLQARFVI PMAVALGFAV
MYATMVTLIL VPCLYLILED IKNIFRAIFA AIGRLFSRKR EKHQAIKNS
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