| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0400 |
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| Symbol | |
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| ID | 4173079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 467916 |
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| End bp | 468995 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053403 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_659984 |
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| Protein GI | 109896729 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.635611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTC CAACTGAAAA GAAAAAGTGG TTAGCCGCGG CATTAACCAT TATTAATGCT
GATTTTAATC GCTCATCCGA CACTCATCTA ATCAAAGTTG ACTTGCCCTG TTTTGTTGAC
GTGTCTCTGT ACCTCAAGGA TGAATCCACC CACCCTACAG GAAGCCTTAA ACATCGCTTG
GCGCGTTCGC TATTTTTATA TGGCTTGTGC AACGGGCTAA TCCATCAAAA TACCACCATT
GTTGAGTCTT CATCTGGCAG TACTGCCATC TCTGAAGCGT ATTTTGCGCG TTTACTTGGC
TTACGCTTTA TTGCCGTGGT GCCCAAAAGC ACGGCGAGTG AGAAGATAAA ACAAATTGAA
TTTTACGGCG GCGAGTGCTT TAAAGTTGAG CCCAGCGACC TTTACGCCAA AGCACAACAA
CTTGCGGACG AATTAAATGG TCACTACATG GACCAATTTA CTTATGCAGA ACGAGCCACG
GATTGGCGAG GCAACAGTAA TATTGCCGAA AGTATTTTTG CTCAGATGGC CATGGAAACA
CATCAAATCC CCAGTTGGAT TGTAGTGAGT GCGGGCACGG GTGGTACCTC AGCCACTATT
GGCCGCTATT TACGCTATAA CCCTGCATTG CACCTTAAGA CCCAGTTAGC GGTTGTCGAC
CCTGATAATT CAGTCTTTTA CGACTACTAC CGAGACCGTG ATAGTGCTAT CAGCAATAAT
AAGGGCTCTC GCATTGAGGG CATTGGCAGG CCCAGGGTTG AGCCTTCCTT TTTGCCCGAC
GTGGTAGATC ACATGATCCA GGTCCCCGAT GCCGCATCCA TTGCCACTAT TCGCTGGCTT
GAAGGCATAC TGGGTCGAAA ATGTGGCGGC TCAACGGGGA CTAACGTATA TGGAGCTCTT
AAGCTTATTG CCCAGATGAT AGAGAATAAG CAGCAAGGTA GTGTAGTGAG CATGATCTGT
GACGCTGGCG AACGCTATCT AAATAGCTAT TACGATGATG ACTGGGTAGC GCAGCAGCAA
TTAGATTTAA CTCCTTATAC CCAACAACTG GAAAACTTTA TGCTGACTGG TGAGATGTAG
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| Protein sequence | MTLPTEKKKW LAAALTIINA DFNRSSDTHL IKVDLPCFVD VSLYLKDEST HPTGSLKHRL
ARSLFLYGLC NGLIHQNTTI VESSSGSTAI SEAYFARLLG LRFIAVVPKS TASEKIKQIE
FYGGECFKVE PSDLYAKAQQ LADELNGHYM DQFTYAERAT DWRGNSNIAE SIFAQMAMET
HQIPSWIVVS AGTGGTSATI GRYLRYNPAL HLKTQLAVVD PDNSVFYDYY RDRDSAISNN
KGSRIEGIGR PRVEPSFLPD VVDHMIQVPD AASIATIRWL EGILGRKCGG STGTNVYGAL
KLIAQMIENK QQGSVVSMIC DAGERYLNSY YDDDWVAQQQ LDLTPYTQQL ENFMLTGEM
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