| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0378 |
|---|
| Symbol | |
|---|
| ID | 4173468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 432193 |
|---|
| End bp | 433590 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638053376 |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding |
|---|
| Protein accession | YP_659962 |
|---|
| Protein GI | 109896707 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4097] Predicted ferric reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA AACTTTTATC AAGGGCTGTA GGGCAGCTAC CTGCAGTAAA ACGCTCACCT
ATGAGTTTTT ACTCATTGGT GGCGATTTAC ATCATATTAA TTCTTGCCCC ATGGGCATTG
TCGTACATTG AGGGGCTGCA AATCCGTGGT TGGTATGAAG AGCTCGTTAC CTTACTCAGC
ATCAGCGGTA TGGCTATGAT GTTGTGTCAA TTTACCTTAC TTAATGGCCG AGTAGATGCT
ATCAACAGCC GAATCGGTGT CGATAACTCC ATGCGCGTGC ACAATAAGGC AGGTGAATAC
CTCGCAATTT TGTTTTTCCT ACATCCTTTT TTGATTGGAT TACCGCGCTT TATTGTTGCG
CCATCTTTTG CTTTGGACAA TTTGTGGATC ATGTTCACCA GCGCCGAGTC TGCTACGGGC
GTATATGCTT GGTCATTGCT GATTGTGTTG GTGTTGATGG CGATTAAAAA GAACAAAGTT
GGCTTGTCTT ACGAGGCTTG GCGCTACACT CATAGTGTGG GGTTTGTAGC CGTTATTATT
TTAGCTACCC ATCATGCAGT CACGGTTGGG CGACATGGCA GATATAACTT ATGGTTTGAC
GTGTTATGGA TTGCCCTTTG CGCAGTCGCT GTTAGCGTGG TGGGTTATGT CTATTTCATT
CGTCCTCGCT CTGTATCGAA AAGACCTTTC ACTGTAGTCG ACTGTCAAAA AGGCAGCGCC
GATGACTGGT ACTTGACCAT TAAAAAAGAT GCTGATTTTC AATTTGAGTT TGATGCAGGC
CAGTTTGTAT GGATCAACAC TTCAGGGAGT GCGTTTAAGC GCAATGAACA TCCGTTTTCA
ATTGCATCAA GCCCTCGCTC GCTACCGGAA CTAAGCTTCG TTATTCGTAA CCTAGGGGAT
TACACCAAGC AATTAGGAAA ATTACAGTTT GGTCAGCGTG TATGGGTTGA TGGACCTCAC
GGTGTATTTA CCTTAAACGC TAGAAATGCC CAAGGCATAG TGTTGCTCGC TGGTGGCGCA
GGCATCGGCC CTATCATTGG AATATTGCGT GGCCTTAATG ATCGCGGCGA TACCCGACCT
ATTCGGTTGA TCTATGGTAA CCGCAATATG GCGCAAATGA TGTTTTTGGA TGAGCTTATC
GACATGACAA AAAACATGAA CCTAGTAACG ACCTTAGTAC TTAATGACGC GCCAGATGAC
TTCCCCCCAA CTGGTTTTCA AGGGCATAAA GGCTTTATTA ACCAAAGTGT AATCGAAGCG
ACTGGGCAGG GCTACAACAC CCAAAATTGG GACTATTACA TTTGTGGCCC CCAGCCAATG
GTTAAAGCCG TTGAGAGGAC GTTGCAGCAG CTTGAGATAC CGCAATCGCG AATTCTATAT
GAACAGTTGG GGTTCTGA
|
|---|
| Protein sequence | MNSKLLSRAV GQLPAVKRSP MSFYSLVAIY IILILAPWAL SYIEGLQIRG WYEELVTLLS
ISGMAMMLCQ FTLLNGRVDA INSRIGVDNS MRVHNKAGEY LAILFFLHPF LIGLPRFIVA
PSFALDNLWI MFTSAESATG VYAWSLLIVL VLMAIKKNKV GLSYEAWRYT HSVGFVAVII
LATHHAVTVG RHGRYNLWFD VLWIALCAVA VSVVGYVYFI RPRSVSKRPF TVVDCQKGSA
DDWYLTIKKD ADFQFEFDAG QFVWINTSGS AFKRNEHPFS IASSPRSLPE LSFVIRNLGD
YTKQLGKLQF GQRVWVDGPH GVFTLNARNA QGIVLLAGGA GIGPIIGILR GLNDRGDTRP
IRLIYGNRNM AQMMFLDELI DMTKNMNLVT TLVLNDAPDD FPPTGFQGHK GFINQSVIEA
TGQGYNTQNW DYYICGPQPM VKAVERTLQQ LEIPQSRILY EQLGF
|
|---|
| |