Gene Patl_0374 details

Gene Information

• Locus tag: Patl_0374
• ID: 4173967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 426937
• End bp: 427623
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053373
• Product: putative cyclase
• Protein accession: YP_659959
• Protein GI: 109896704
• COG category: [R] General function prediction only
• COG ID: [COG1878] Predicted metal-dependent hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACTGACC CTCGATCTAA CAAACGTACC TTTATCGATT TGAGCCATCG CATATACGAC 
GGCTTAATCA CGTACAAAGG TTTACCTGCG CCCATTATGT GCGACTACCT AAGCCGCGAA 
GAATCGAAAA AGGTTTACGG TGATGACTAT CAAGTGCAAA TCGGCAAAAT CGAAATGGTT 
AGTAATACCG GCACCTATAT CGACACACCT TTTCATTTTG CCGCTGATGG TGACGACCTT 
GCACAAGTGT CGTTAGCGCT GTTGGCTGAT TTACCCACCG TGGTGATTGA TGCAAAAGAT 
AACATCGAGA TTGGCCTGCA CTTTTTCAAA GAGACAGATG TGGCAGATAA GGCCGTGCTT 
ATTAATACCA ATTGGAGCAA GCATTGGAAC AGCGAGCAAT ACTTTGAAAA CCATGCTTAT 
TTGACTGAAG AAGCTGCGCA GTGGCTACTT GATAACGGCG CCAAATTGGT GGGCATTGAT 
TCACACAATA TTGATGATAC CCGCGGCCGA AAACGCCCAG TACACAGCTT GCTATTGGCG 
AATAACGTAC TGATTTGCGA GCACCTTACC AATTTGGATA AAGTGCCCAC CCAGGGTGCA 
CGTTTTTATG CGGTGCCGCC TAAAATAACC GGTGTCGGCA CCTTTCCTGT TAGGGCATTT 
GTGCAAATTG AAAAGAGTAA TAACTAA 

 

Protein sequence

MTDPRSNKRT FIDLSHRIYD GLITYKGLPA PIMCDYLSRE ESKKVYGDDY QVQIGKIEMV 
SNTGTYIDTP FHFAADGDDL AQVSLALLAD LPTVVIDAKD NIEIGLHFFK ETDVADKAVL 
INTNWSKHWN SEQYFENHAY LTEEAAQWLL DNGAKLVGID SHNIDDTRGR KRPVHSLLLA 
NNVLICEHLT NLDKVPTQGA RFYAVPPKIT GVGTFPVRAF VQIEKSNN