Gene Patl_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0356 
Symbol 
ID4173179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp413007 
End bp413486 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content49% 
IMG OID638053355 
Productredoxin 
Protein accessionYP_659941 
Protein GI109896686 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAACG TTGGCGATAC CTTACCCGAA GTGACTTTTA GCTTGCGCGA AAATGGCGAA 
GCTAGTAACC CCACAACCGT TGACTTATTT GCGGATAAGA AAGTGGTGTT GTTTGCTGTT
CCTGGCGCAT TTACACCAAC TTGTTCGAAT ACCCATTTGC CAGGCTATAT TGCTTTGGCT
GACAAACTAG CGGCAAAAGG CGTTGATAGC ATTATCTGTT TATCGGTGAA CGATGCATTT
GTGATGGAAG CCTGGGGCAA GTCACAAAAC GCAGAGAACG TGACTATGCT CGCTGATGGC
GGTGCTGCGT TTAGCCAAGC CATTGGCCTT GCTAAAGACA CAGGCACCTT CGGTGGCTTA
CGCTCTGGCC GTTATTCTAT GCTAGTGGAA AACGGTGTCG TTAAGGCACT AAACATCGAA
GCCCCTGGCA AGTTTGAAGT CAGTGACGCG CAGACTATGT TGGCGGCATT AAACGGCTAA
 
Protein sequence
MINVGDTLPE VTFSLRENGE ASNPTTVDLF ADKKVVLFAV PGAFTPTCSN THLPGYIALA 
DKLAAKGVDS IICLSVNDAF VMEAWGKSQN AENVTMLADG GAAFSQAIGL AKDTGTFGGL
RSGRYSMLVE NGVVKALNIE APGKFEVSDA QTMLAALNG